Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32476
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    26   0.29 
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    26   0.29 
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    26   0.29 
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    26   0.29 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   8.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.3  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 584 NYIIYNNSRCCNNSFWNPRYLIINYFGSTCFPL 682
           NY  YNN+   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 478 NWIIYNHSRCCNNSFGTHRYLIINYFGXTCFPL 576
           N+  YN++   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 584 NYIIYNNSRCCNNSFWNPRYLIINYFGSTCFPL 682
           NY  YNN+   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 478 NWIIYNHSRCCNNSFGTHRYLIINYFGXTCFPL 576
           N+  YN++   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 584 NYIIYNNSRCCNNSFWNPRYLIINYFGSTCFPL 682
           NY  YNN+   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 478 NWIIYNHSRCCNNSFGTHRYLIINYFGXTCFPL 576
           N+  YN++   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 584 NYIIYNNSRCCNNSFWNPRYLIINYFGSTCFPL 682
           NY  YNN+   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 478 NWIIYNHSRCCNNSFGTHRYLIINYFGXTCFPL 576
           N+  YN++   NN++   +Y  INY      P+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 118 FLLRFDFNQSCSGFCSDSFYGFRFNNHNF 204
           F L +++  + S       YGF FN+ NF
Sbjct: 369 FPLEYEYVLAVSNRIQKVIYGFDFNDVNF 397


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 584 NYIIYNNSRCCNNSFWNPRYLIINY 658
           N  I+NN+   NN++ N  Y   NY
Sbjct: 87  NKTIHNNNNYNNNNYNNYNYNNNNY 111


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 478 NWIIYNHSRCCNNSFGTHRYLI 543
           N ++YNH+R  +    +  YL+
Sbjct: 217 NLLLYNHARLMSQDNHSKEYLV 238


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 573 REASVTEVINDEVSVGSKTIVAAPAVVVNDPIESSTGASATEVIN 439
           R +  T  +    + GS ++ A+PA      +ESST +   E  N
Sbjct: 222 RPSYTTATMATTSTPGSGSLPASPADSGVSDVESSTSSGGNEDAN 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,582
Number of Sequences: 438
Number of extensions: 2849
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)