Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32475
         (400 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical ...    29   1.2  
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF039039-3|AAB94175.3|  161|Caenorhabditis elegans Hypothetical ...    26   8.7  

>AF038609-3|AAU87825.1|  193|Caenorhabditis elegans Hypothetical
           protein C54E4.5 protein.
          Length = 193

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 49  WNELPSTVFPERYDMSFFKQGLWRVLNDSQPLSSAPSIAVVHGR 180
           W  L   +      MS + +  W V  D+ P+  AP+ ++V+G+
Sbjct: 106 WMHLAGLIHDLGKIMSVWGEEQWAVTGDTYPVGCAPAASIVYGK 149


>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
           protein F31E3.4 protein.
          Length = 1131

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 216 VKSNKIIQXNVMENRLRNLEEFYFPFAVTLY 308
           V+ NK+I   V  NRL+N+++F   + + +Y
Sbjct: 199 VQGNKLITCGVSMNRLKNMDQFIKVYDLRMY 229


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 396 EYPKGRKNQRKINCKSSLIFD 334
           E PKG+KN+RK   K + IFD
Sbjct: 368 ETPKGKKNKRKDRKKGNGIFD 388


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
           protein K07G5.3 protein.
          Length = 1202

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 176 GDGNHSPSGGPCARQEQ*NNSXKRNGKQITKS*RILFSIRCNVIL 310
           GDG  SPS GP  + E+     K+N ++  K   + F  +   IL
Sbjct: 43  GDGEQSPSPGPFTKDEK---DKKQNRRESIKEHLMKFKAKAGKIL 84


>AF039039-3|AAB94175.3|  161|Caenorhabditis elegans Hypothetical
           protein T08B1.4 protein.
          Length = 161

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 16  SRSFLPRTIRLWNELPSTVFPERYDMSFFKQGLWRV 123
           +R FL   + LW E+   +   R+ +SFFK+ L+R+
Sbjct: 122 NRYFLNAHLVLWPEIEKVITNPRWAVSFFKK-LFRI 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,406,573
Number of Sequences: 27780
Number of extensions: 185080
Number of successful extensions: 448
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)