Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32467
(538 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 61 1e-10
SPAC1039.07c |||4-aminobutyrate aminotransferase |Schizosaccharo... 57 1e-09
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 50 2e-07
SPBC1773.03c |||aminotransferase class-III, unknown specificty|S... 39 4e-04
SPCC417.11c |||glutamate-1-semialdehyde 2,1-aminomutaseaminotran... 38 0.001
SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase |Schizosacch... 36 0.003
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 29 0.58
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 3.1
SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomy... 26 4.1
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 25 5.4
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 25 9.5
SPBC8D2.15 |||mitochondrial lipoic acid synthetase |Schizosaccha... 25 9.5
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 25 9.5
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 60.9 bits (141), Expect = 1e-10
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Frame = +2
Query: 203 SITNAYXK-PVLLTQGHMQWXYXNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLW 379
+I + Y + PV+ +G + + +G++Y+D G+ S+GH HP+V DQ L
Sbjct: 46 NIISVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLV 105
Query: 380 HTTNL-YRHP--KIYEYVEQLAAKLPG--DLNVVYLLNSGSEANELATLLAK 520
H++NL Y P ++ + AK G ++ N G+EANE A A+
Sbjct: 106 HSSNLFYNEPAIELSNVINNSLAKNSGIAGPTKIFFANCGTEANETALKFAR 157
>SPAC1039.07c |||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 57.2 bits (132), Expect = 1e-09
Identities = 28/89 (31%), Positives = 44/89 (49%)
Frame = +2
Query: 263 YXNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAK 442
Y LD G ++ +GH HP + A ++ L L H + + P + + +L+
Sbjct: 45 YDEQDNAILDFTSGQMSAILGHSHPDITACIEKNLPKLVHLFSGFLSPPVVQLATELSDL 104
Query: 443 LPGDLNVVYLLNSGSEANELATLLAKAYT 529
LP L+ L++G EANE A +AK YT
Sbjct: 105 LPDGLDKTLFLSTGGEANEAALRMAKVYT 133
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 50.0 bits (114), Expect = 2e-07
Identities = 31/123 (25%), Positives = 59/123 (47%)
Frame = +2
Query: 158 SYQQVEQMKGVYMPPSITNAYXKPVLLTQGHMQWXYXNDGKRYLDLFGGIVTVSVGHCHP 337
S +Q+E ++ Y + N + PV ++ + +G+ YLD V+ GHCHP
Sbjct: 12 STEQIEVLENEY---AAHNYHPLPVCFSKAKGAKVWDPEGREYLDFLSAYSAVNQGHCHP 68
Query: 338 KVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLLNSGSEANELATLLA 517
K+ AL +Q + ++ + + K + + + +V +N+G+EA E A LA
Sbjct: 69 KIIEALVEQAQRVTLSSRAFYNDKFGPFAKYITEYF--GYEMVIPMNTGAEAVETACKLA 126
Query: 518 KAY 526
+ +
Sbjct: 127 RLW 129
>SPBC1773.03c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 39.1 bits (87), Expect = 4e-04
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 209 TNAYXKPVLLTQGHMQWXYXNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTT 388
T+ +P + + + Y DG R +D GG +GH + +V A+ Q + + +
Sbjct: 22 TSPNHRPPTVVRAEGVYLYLEDGTRIMDATGGAAVACLGHGNKEVIDAMHKQSEKVCYIH 81
Query: 389 NL-YRHPKIYEYVEQLAAKLPGDLNVVYLLNSGSEANELATLLAKAY 526
++ + + + L ++ P Y NSGSEA E L Y
Sbjct: 82 SMGFSNEPADKLANLLVSEHPDVFARAYFANSGSEAVETCLKLILQY 128
>SPCC417.11c |||glutamate-1-semialdehyde
2,1-aminomutaseaminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 435
Score = 37.5 bits (83), Expect = 0.001
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +2
Query: 227 PVLLTQGHMQWXYXNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 406
P+ + G+ DG Y D + GH +P + AL D + +
Sbjct: 52 PIFIEAGYGSKLRDVDGHEYTDFLNELTAGIYGHSNPVIKKALMQGFDEIGISLGGTTTC 111
Query: 407 KIYEYVEQLAAKLPGDLNVVYLLNSGSEANELATLLAKAYTG 532
++ Y E L ++ + + NSG+EAN A + A+ +TG
Sbjct: 112 EL-NYAEALKSRFL-SIEKIRFCNSGTEANITAIIAARKFTG 151
>SPAC19D5.07 |uga1||4-aminobutyrate aminotransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 474
Score = 36.3 bits (80), Expect = 0.003
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 272 DGKRYLDLFGGIVTVSVGHCHPKV-NAALKDQL-DVLWHTTNLYRHP-KIYEYV--EQLA 436
DG LD++ I T+ +G+ +P + AA D++ +L + L +P K + V E
Sbjct: 67 DGNVLLDVYSQIATIPIGYNNPTLLKAAKSDEVATILMNRPALGNYPPKEWARVAYEGAI 126
Query: 437 AKLPGDLNVVYLLNSGSEANELATLLAKAYTGN 535
P VY SGS+ANE+A LA + N
Sbjct: 127 KYAPKGQKYVYFQMSGSDANEIAYKLAMLHHFN 159
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 28.7 bits (61), Expect = 0.58
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 275 GKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKI-YEYVEQLAAKLPG 451
G +LDL GG+ V+VG+ + V L+ D + + + + +A PG
Sbjct: 88 GTEHLDLIGGVGVVTVGNNNQYVWDCLQKCFDAKLYMMGAISYRNLAAAFGRNMALLSPG 147
Query: 452 D-LNVVYLLNSGSEANE 499
L + G+EANE
Sbjct: 148 QKLTRTWTATGGAEANE 164
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 94 NVQHGQNAADGISCPGPYTGTFVPTSRTNERSLHAAFNHERL 219
NVQ ++++ + P T +PT +E SL+ N RL
Sbjct: 255 NVQSNSSSSENVPKPNAETQEDLPTIDAHESSLYENVNDSRL 296
>SPAC6B12.04c |||aminotransferase class I and II|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 50 EMANRGT--KLCFDIVRTYSTAKMPPTGF 130
E+ANR KLC+ I++ A +PPT F
Sbjct: 355 EIANRPRDFKLCYWILKEIGVATIPPTEF 383
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/61 (16%), Positives = 27/61 (44%)
Frame = +2
Query: 38 EKHIEMANRGTKLCFDIVRTYSTAKMPPTGFRAQDRTRGPSYQQVEQMKGVYMPPSITNA 217
E+ +++A + C+++ +T P F D+T+ Y + + P ++ +
Sbjct: 360 ERDVKLAQELMRTCYEMYNMTATGLAPEIVFFDVDQTKNEIYSKRRDQHNLMRPETVESL 419
Query: 218 Y 220
+
Sbjct: 420 F 420
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 24.6 bits (51), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 349 CIYFRMTMAHGDGDDSTEQIQ 287
C+YF T+ + +GDD IQ
Sbjct: 48 CVYFYHTLENQEGDDERPLIQ 68
>SPBC8D2.15 |||mitochondrial lipoic acid synthetase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 370
Score = 24.6 bits (51), Expect = 9.5
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 395 YRHPKIYEYVEQLAAKLPGDLNVVY--LLNSGSEANE-LATLLAKAYTGN 535
Y HPK +EY +++A KL G L V L+ S +A E L K +GN
Sbjct: 316 YVHPKKFEYWKEVAEKL-GFLYVASGPLVRSSYKAGEYFMENLIKKRSGN 364
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 24.6 bits (51), Expect = 9.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 392 LYRHPKIYEYVEQLAAKLPGDLNVVYLLNSGSEANELATLLAKAYT 529
L+ H K +EQL A P + NV +LL + L K +T
Sbjct: 580 LHDHDKALVELEQLKAIAPDEANVHFLLGKIFKQMRKKNLALKHFT 625
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,355,766
Number of Sequences: 5004
Number of extensions: 48224
Number of successful extensions: 121
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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