Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32466
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.11
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 31 0.20
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 30 0.26
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.34
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.34
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 30 0.34
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 29 0.60
SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 0.80
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.1
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 1.8
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 27 2.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.4
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 3.2
SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit S23... 26 4.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 4.2
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 26 5.6
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 5.6
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 7.4
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 25 7.4
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 7.4
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 9.8
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 25 9.8
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.5 bits (68), Expect = 0.11
Identities = 21/92 (22%), Positives = 37/92 (40%)
Frame = +3
Query: 237 MRCLKAYASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSF 416
M +++S S +S S + S +TTS+ ++ F S S +
Sbjct: 326 MSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTS 385
Query: 417 EEVSPSDLAELQAHKSGSERRKSSDTTISAAS 512
S S A +H S KSS ++ S+++
Sbjct: 386 SSSSSSRPASSSSHSSSLSSHKSSSSSKSSSA 417
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 30.7 bits (66), Expect = 0.20
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 36 TTGKRIVFAGDSAGANLVAACTVKILSTGLRKPDGM 143
T + I+F GDS+GA L+ A V I + L P G+
Sbjct: 203 TKPENIIFMGDSSGAGLIVASLVLIRDSKLPLPAGV 238
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 30.3 bits (65), Expect = 0.26
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Frame = +3
Query: 264 PNMSGNSKDSKDDKENNQSVLPNT-TSTPSDTNGFLKVSQSQEGISE----GPS-SFEEV 425
P S K ++ + + LPN T+ DTN K++ S+E I+ GPS + E+
Sbjct: 413 PQSSSTPKSAQKTPQKLPAFLPNRLTAETVDTN---KLTASKEQIASPKRPGPSDNGNEI 469
Query: 426 SPSDLAELQAHKSGSER-RKSSDTTISA-------ASLQSEHTVTGTTPPEDKSQ 566
+ ++ K G +R TT+SA AS Q +HT + PP+ SQ
Sbjct: 470 PTKFVQKVTITKEGKKRVAPQLLTTLSATPSTSRLASTQLQHTGSSQLPPQQFSQ 524
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 29.9 bits (64), Expect = 0.34
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = +3
Query: 246 LKAYASPNMSGNSKDSKDDKE-NNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEE 422
L + AS ++ +S + ++ SV+P+++S+ ++ +S S SSF
Sbjct: 14 LSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSF-- 71
Query: 423 VSPSDLAELQAHKSGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQY 572
SP+ + + + S S ++ SS + +S + T + + P S +
Sbjct: 72 TSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSH 121
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.34
Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
Frame = +3
Query: 246 LKAYASPNMSGNSKDSKDDKENNQSVLP----NTTSTPSDTNGFLKVSQSQEGISEGPSS 413
+K S S S + +E ++V+ +S+ S + S+S+ SE
Sbjct: 128 VKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEE 187
Query: 414 FEEVSPSDLAELQAHKSGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQ 569
E V ++ + + +S S+ SSD++ + S + ED+ ++
Sbjct: 188 EEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKR 239
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 29.9 bits (64), Expect = 0.34
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +3
Query: 300 DKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFE-------EVSPSDLAELQAH 458
+ ENN + TPS+ F + Q + + + +E E+ P+D
Sbjct: 99 EHENNSDY---ASITPSNHPAFTSCAYLQNPVVDSNNEYESKFRLSLEIPPTDFLSTSTE 155
Query: 459 KSGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQ 569
S E S++T+ S S + T+T T E +S Q
Sbjct: 156 LSKRESCLSTETSSSKFSAVTAATITNETQSEKRSSQ 192
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 303 KENNQSVLPNTTS-TPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAELQAHKSGSERR 479
K N +LPN TS + D N + +E S+ SS ++ + A+ + + ++
Sbjct: 432 KNQNDQILPNETSESDDDANSISSMENEEERTSDSKSSAKQGKGNGRAKETPEEKRARKK 491
Query: 480 KSSD 491
K+ +
Sbjct: 492 KTKE 495
>SPCC4F11.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 0.80
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 324 LPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSP-SDLAELQAHKSGSERRKSSDTTI 500
L S PS N F S+ G S E +L + + + K+++ T+
Sbjct: 107 LQGNVSLPSGNNFFTSSFDSENISKPGEVSLSESQLLGNLNQQSSIQLPDRMPKTTNGTL 166
Query: 501 SAASLQSEHTVTGTTPPEDKSQQYVTDFLXRYVLDSDTDFRGAETE 638
+ ++ + TV +D SQQ+ Y+ D+D+ G T+
Sbjct: 167 ADPNMPPKTTVNDQDVTKDASQQFGGSNFSNYLRDNDSFQFGMNTD 212
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 306 ENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDLAELQ 452
+NN +V P T T D+ + +++ PSSFE+ + D ++L+
Sbjct: 395 QNNSAVQPTTQKTSEDSTDLH--TNEIPNVAQPPSSFEKENNKDTSKLE 441
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 255 YASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEG 404
+ SPN+ NSK + +N S +P++ T S+ + L V S++ IS G
Sbjct: 210 HVSPNVKNNSKKTASSVNSNHSSIPSSI-TKSNISS-LDVYGSEKLISSG 257
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 279 NSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEVSPSDL 440
NSK S+ + N + TS+P + SQ Q I++ EE PSDL
Sbjct: 686 NSKISEKQENNVAETILEVTSSPKSSEN----SQKQSEITKKRGRDEEDEPSDL 735
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +3
Query: 258 ASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEE----V 425
+S + S +S S ++ S ++++PS + K S S S P+S V
Sbjct: 183 SSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIV 242
Query: 426 SPSDLAELQAHKSGSERRKSSDTTISAAS 512
S + A S S S + +S+AS
Sbjct: 243 SNAKTASTDDSSSASSATSSVSSVVSSAS 271
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 18 NFKTVGTTGKRIVFAGDSAGANLVAACTVKILSTGLRKP 134
N T+G +I G SAG N+ A + K+ ++ P
Sbjct: 164 NADTLGINPNKIAVGGSSAGGNIAAVLSHKVAASPANFP 202
>SPBC29A3.15c |rsm23||mitochondrial ribosomal protein subunit
S23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Frame = +3
Query: 270 MSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEG-------ISEGPSSFEEVS 428
+ GN S + + S P P T+ K + ++EG ++ EEV
Sbjct: 61 VGGNIHSSSNQQRQKNSEAPRINEIPPSTSSVEKSTTIPNSSVVLDHLLNEGENTLEEVK 120
Query: 429 PSDLAELQAHKSGSE 473
PS++ + S SE
Sbjct: 121 PSEIHPHMSWSSKSE 135
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 4.2
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Frame = +3
Query: 252 AYASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGF-LKVSQSQEGISEGPSSFEEVS 428
A A + G +D + + +Q+ L + S L+V +S + IS S EE+
Sbjct: 184 AKALDQIKGLKRDQETQVKVDQATLTHYRSDKERAEKIELRVHESLKRISCIRSKVEELD 243
Query: 429 P--SDLAELQAHKSGSERRKSSDTTISAASLQSEHTVTGTTPPEDKSQQYVTD 581
++ A LQ S I+ L+S+ + TT + KSQ +TD
Sbjct: 244 QEITETARLQDELFKSTEEYEQQM-ITIRHLESQSDIINTTINDLKSQMTITD 295
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 246 LKAYASPNMSGNSKDSKDDKENNQSVLPNTTSTPSDTNGFLKVSQS 383
LK Y PN+ + K+ + PN + FLKV S
Sbjct: 959 LKKYDQPNLKVSGKNDSFVTHHTPGAFPNDSKNKELNRHFLKVDDS 1004
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 5.6
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 306 ENNQSVLPNTTSTPSDT-NGFLKVSQSQEGISEGP--SSFEEVSPSDLAELQAHKSGSER 476
+NN P T S T + + S +Q IS P S+ + + S+ AEL + S +
Sbjct: 1370 QNNFISKPFNVHTLSTTLSPWAMKSLAQAAISPNPMPSAHDLLPTSNPAELFTNISPEIK 1429
Query: 477 RKSSDTTISAASLQSEHTVT 536
S D+T + L S H V+
Sbjct: 1430 ELSVDSTSTLGGLNSSHLVS 1449
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.4 bits (53), Expect = 7.4
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 294 KDDKENNQSVLPNTTSTPSDTNGFLKVSQSQEGISEGPSSFEEV-SPSDLAELQAHKSGS 470
K ++ S LPN +T S N +K S ++ PS+ + P+ +L K+
Sbjct: 30 KSISPSSGSELPNFKTTISQNNEEVKTSLKEDSSKFHPSASAPIFVPTSSVQLNVSKNNG 89
Query: 471 ERRKSSDTTISAASLQSE 524
K+SD + +S E
Sbjct: 90 --HKASDIVDAVSSKDEE 105
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 252 AYASPNMSGNSKDSKDDKENNQSVLPNT----TSTPSDTNGFLKVSQSQ 386
A S N SGN + DKE++ + P T + PS + + Q+Q
Sbjct: 285 ADVSNNESGNESSKEPDKEHSTPIHPTTPVSRCARPSSRQQTISILQAQ 333
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.4 bits (53), Expect = 7.4
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Frame = +3
Query: 180 PSPARLLCLMDPILPFGFMMRCLKAYASPNMSGNSKDSKDDKEN----NQSVLPNTTSTP 347
PS RL + P+ + SP S N + +E+ + P+TTS
Sbjct: 541 PSRPRLPRVASPLKTSPVKLAVTPQAPSPLPSSNPSQASLTEESLSTRSSPTKPSTTSLR 600
Query: 348 SDT--NGF----LKV-SQSQEGISEGPSSFEEVSPSDLAELQAHKSGSERRKSSDTTISA 506
S + N F LK S S +G+S SS + S + S +K +T+ A
Sbjct: 601 SQSLVNRFASSTLKAPSSSSKGVSNAASSKQSFPSSPSISKKLETSRLSTKKLPGSTMKA 660
Query: 507 ASLQSEH 527
AS E+
Sbjct: 661 ASALKEY 667
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 149 QEHAIRLTQAGRQYLHSASRDQIGTSRIPGEH 54
Q + +LTQ ++L+ S + +G PGE+
Sbjct: 824 QRYLQQLTQYSEKFLNKESENTVGLLNAPGEN 855
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.0 bits (52), Expect = 9.8
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Frame = +3
Query: 261 SPNMSGNSKDSKDDKENNQSVLPNTTSTPS----DTNGFLKVSQSQEGIS---EGPSSFE 419
+PN ++ +D ++++ LP+ S+PS T + + S G S G SF
Sbjct: 140 TPNRIYGDRNRQDYAQSSRYTLPSLPSSPSYNCPTTLRKIHTNTSSNGTSRRVSGLGSFM 199
Query: 420 EVSPSDLA--ELQAHKSGS---ERRKSSDTTISAASLQSEHTVTGT 542
+ S+ + A+ GS E+ K S T+ AS+ S H+ T +
Sbjct: 200 AQNSSETSSNRTSAYLPGSSTDEQEKRSSVTL--ASMPSSHSSTAS 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,506,154
Number of Sequences: 5004
Number of extensions: 48211
Number of successful extensions: 229
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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