Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32445
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 221 ICQLDEYCSPETNRC 265
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 0.84
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 221 ICQLDEYCSPETNRC 265
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>AF098996-2|AAC68711.3|  431|Caenorhabditis elegans Hypothetical
           protein T11F1.6 protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 86  VCSCENVHGAL*ITEREMSGFVCVLILAGVASAQITLDGIRCGQLICQ 229
           + + EN+H    +T  EM GF+   +      A   LDG+   + +CQ
Sbjct: 295 IMNLENLHPDFCLTFHEMIGFLDAQVYFKNIHANYCLDGVSFSESLCQ 342


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 197 DGIRCGQLICQLDEYCSPETNRCAPCNVVCXKTHHNYDSGLCVKEC 334
           D   C ++ C+ +E+    TN C P  VVC      +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 197 DGIRCGQLICQLDEYCSPETNRCAPCNVVCXKTHHNYDSGLCVKEC 334
           D   C ++ C+ +E+    TN C P  VVC      +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z81067-4|CAB02976.2|  632|Caenorhabditis elegans Hypothetical
           protein F23A7.5 protein.
          Length = 632

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +1

Query: 382 PATQRFGKHTP*SSNCSDRHRCGSGST 462
           P  Q+FG   P SS  SD H    GST
Sbjct: 375 PHQQKFGGSIPVSSTLSDSHTSNGGST 401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,648,253
Number of Sequences: 27780
Number of extensions: 273590
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)