Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32444
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z81489-12|CAJ30224.1|  142|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U53155-9|AAC48273.1|  328|Caenorhabditis elegans Seven tm recept...    28   5.9  

>U80025-1|AAD32271.1| 1064|Caenorhabditis elegans Hypothetical
           protein F02C9.3 protein.
          Length = 1064

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 183 RNTILTLYAFVTPIFYGQXKLFLQSFFLIWRFAQIALINGMSMLLT 46
           RN    +++FV  + + + K FL  +FLI  F+Q+  I  +  L+T
Sbjct: 99  RNQKYNIFSFVPVVLFQEFKFFLNLYFLIMAFSQLVPIFKIGALVT 144


>Z81489-12|CAJ30224.1|  142|Caenorhabditis elegans Hypothetical
           protein C55A1.15 protein.
          Length = 142

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = -2

Query: 252 SKFSCVLIKYVFVPAFL--SRKTERRNTILTLYAFVTPIFYGQXKLFLQSFFLIWRFAQI 79
           S  + ++I  V +P ++  ++    R+  + +Y  +T  F    K+F    +LI+ FA I
Sbjct: 30  SLIAFMIIYSVLLPLYIYTNKVNHERDKEILIYP-ITKHFCQMVKIF----YLIFVFASI 84

Query: 78  ALINGMSMLLTKIIMSMDIPYCFGFF 1
            L     + L  +I+ + + +CFG F
Sbjct: 85  ILSVFEKLYLLNVIIPVIVFFCFGLF 110


>Z81533-2|CAB04342.1|  432|Caenorhabditis elegans Hypothetical
           protein F36G9.3 protein.
          Length = 432

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -1

Query: 274 QIIATNDVKVFMCINKICFCA-SIPFP-ENRTAKYYSNSICVCHSDILWT 131
           QI+ T   K  MCI  +C+ +  + F   N T  Y S++I    S ILWT
Sbjct: 67  QIVDTLTPKWAMCIGALCYASFQVGFLFLNSTYLYISSAILGFGSSILWT 116


>U53155-9|AAC48273.1|  328|Caenorhabditis elegans Seven tm receptor
           protein 138 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -1

Query: 247 VFMCINKICFCAS-IPFPENRTAKYYSNSICVCHSDILWT 131
           +F+C + ICFC S I   + R  +Y S      +  +L T
Sbjct: 207 IFICFSTICFCTSQIMMKQKRQQQYMSEKTKEMNKQLLKT 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,297,842
Number of Sequences: 27780
Number of extensions: 200209
Number of successful extensions: 398
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)