Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32434
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M79462-1|AAA60388.1|  860|Homo sapiens PML protein.                    30   7.2  
BC139795-1|AAI39796.1|  540|Homo sapiens PML protein protein.          30   7.2  
AF230401-1|AAG50180.1|  882|Homo sapiens tripartite motif protei...    30   7.2  
AB209411-1|BAD92648.1|  862|Homo sapiens promyelocytic leukemia ...    30   7.2  

>M79462-1|AAA60388.1|  860|Homo sapiens PML protein.
          Length = 860

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 148 SKVSSIVTTAAPPFKPKRLFRGRNRQGGGTYPRGLTRGPTTSKVKG 11
           S+  S+ TT  PP +P       N Q  GTY  GL  GP  ++ +G
Sbjct: 802 SRYLSLQTTTLPPAQP-----AFNLQALGTYFEGLLEGPALARAEG 842


>BC139795-1|AAI39796.1|  540|Homo sapiens PML protein protein.
          Length = 540

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 148 SKVSSIVTTAAPPFKPKRLFRGRNRQGGGTYPRGLTRGPTTSKVKG 11
           S+  S+ TT  PP +P       N Q  GTY  GL  GP  ++ +G
Sbjct: 482 SRYLSLQTTTLPPAQP-----AFNLQALGTYFEGLLEGPALARAEG 522


>AF230401-1|AAG50180.1|  882|Homo sapiens tripartite motif protein
           TRIM19 alpha protein.
          Length = 882

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 148 SKVSSIVTTAAPPFKPKRLFRGRNRQGGGTYPRGLTRGPTTSKVKG 11
           S+  S+ TT  PP +P       N Q  GTY  GL  GP  ++ +G
Sbjct: 824 SRYLSLQTTTLPPAQP-----AFNLQALGTYFEGLLEGPALARAEG 864


>AB209411-1|BAD92648.1|  862|Homo sapiens promyelocytic leukemia
           protein isoform 1 variant protein.
          Length = 862

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 148 SKVSSIVTTAAPPFKPKRLFRGRNRQGGGTYPRGLTRGPTTSKVKG 11
           S+  S+ TT  PP +P       N Q  GTY  GL  GP  ++ +G
Sbjct: 804 SRYLSLQTTTLPPAQP-----AFNLQALGTYFEGLLEGPALARAEG 844


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,281,635
Number of Sequences: 237096
Number of extensions: 1394041
Number of successful extensions: 2208
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2207
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)