Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32433
(469 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 77 2e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 77 2e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 72 3e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 72 3e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 72 3e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 72 3e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 72 4e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 72 4e-13
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 69 2e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 68 7e-12
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 65 4e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 65 4e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 64 7e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 63 2e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 63 2e-10
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 63 2e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 62 3e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 4e-10
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 61 6e-10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 59 3e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 58 4e-09
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 54 7e-08
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 50 2e-06
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 42 3e-04
BT012431-1|AAS93702.1| 852|Drosophila melanogaster RH69719p pro... 28 7.2
BT011466-1|AAR99124.1| 852|Drosophila melanogaster RE25460p pro... 28 7.2
BT006026-1|AAO85560.1| 833|Drosophila melanogaster RE14149p pro... 28 7.2
AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p pro... 28 7.2
AF132163-1|AAD34751.1| 855|Drosophila melanogaster unknown prot... 28 7.2
AE014298-1581|AAF48017.1| 424|Drosophila melanogaster CG11105-P... 28 7.2
AE014298-1580|AAN09292.1| 488|Drosophila melanogaster CG11105-P... 28 7.2
AE014297-4333|AAN14159.1| 836|Drosophila melanogaster CG1709-PD... 28 7.2
AE014297-4332|AAN14158.1| 836|Drosophila melanogaster CG1709-PB... 28 7.2
AE014297-4331|AAN14157.1| 850|Drosophila melanogaster CG1709-PG... 28 7.2
AE014297-4330|AAN14156.1| 833|Drosophila melanogaster CG1709-PF... 28 7.2
AE014297-4329|AAN14155.1| 833|Drosophila melanogaster CG1709-PA... 28 7.2
AE014297-4328|AAN14154.1| 855|Drosophila melanogaster CG1709-PE... 28 7.2
AE014297-4327|AAF56861.1| 855|Drosophila melanogaster CG1709-PC... 28 7.2
AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-P... 28 7.2
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/149 (34%), Positives = 74/149 (49%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NAG
Sbjct: 606 VTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAG 665
Query: 200 VPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIGHQSLSQSVVQERRSKLVSEV 379
VPQGSVL PTLF ++ +D+ +C + DA + S S + + ++E+
Sbjct: 666 VPQGSVLGPTLFNIFTHDI--PQATNCVLSLFADDAA-VYSAGFSYSEINQSMQSYLNEL 722
Query: 380 ESSLGRVSKWGELNLVQFNPLKTQVCAFT 466
+ KW ++ NP KT FT
Sbjct: 723 DI---YYKKW----KIKINPNKTNAIFFT 744
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/149 (34%), Positives = 74/149 (49%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V+LDI AFD VWH LL KL G P L K + +FL R +V ++ S +NAG
Sbjct: 554 VTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAG 613
Query: 200 VPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIGHQSLSQSVVQERRSKLVSEV 379
VPQGSVL PTLF ++ +D+ +C + DA + S S + + ++E+
Sbjct: 614 VPQGSVLGPTLFNIFTHDI--PQATNCVLSLFADDAA-VYSAGFSYSEINQSMQSYLNEL 670
Query: 380 ESSLGRVSKWGELNLVQFNPLKTQVCAFT 466
+ KW ++ NP KT FT
Sbjct: 671 DI---YYKKW----KIKINPNKTNAIFFT 692
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TIN 193
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 239
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS+L P L+ +Y +DM
Sbjct: 240 AGVPQGSILGPVLYSIYSSDM 260
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TIN 193
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS+L P L+ +Y +DM
Sbjct: 687 AGVPQGSILGPVLYSIYSSDM 707
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TIN 193
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS+L P L+ +Y +DM
Sbjct: 687 AGVPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TIN 193
A LDI +AFDRVWH LL KL S IP L + ++L R+ +V +DG+ + + I
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKL-SRLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS+L P L+ +Y +DM
Sbjct: 687 AGVPQGSILGPVLYSIYSSDM 707
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 71.7 bits (168), Expect = 4e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 181
K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S
Sbjct: 577 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSI 635
Query: 182 MTINAGVPQGSVLSPTLFILYINDM 256
I AGVPQGSVL PTL+ ++ +DM
Sbjct: 636 KPIAAGVPQGSVLGPTLYSVFASDM 660
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 71.7 bits (168), Expect = 4e-13
Identities = 41/85 (48%), Positives = 50/85 (58%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 181
K A+ LDI +AFDRVWH LL K P L + SFL+ R+ V VDG S
Sbjct: 379 KEYAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSI 437
Query: 182 MTINAGVPQGSVLSPTLFILYINDM 256
I AGVPQGSVL PTL+ ++ +DM
Sbjct: 438 KPIAAGVPQGSVLGPTLYSVFASDM 462
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW L+ K+ +P+ + K + S+LD R V S TI A
Sbjct: 117 ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEA 175
Query: 197 GVPQGSVLSPTLFILYINDM 256
GVPQGSVL P L+ LY D+
Sbjct: 176 GVPQGSVLGPILYTLYTADI 195
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 67.7 bits (158), Expect = 7e-12
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 196
AV LD+++AFD+VW L+ K+ +PE K + S+L R V + S TI A
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
Query: 197 GVPQGSVLSPTLFILYINDM 256
GVPQGSVL PTL+++Y D+
Sbjct: 637 GVPQGSVLGPTLYLIYTADI 656
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 683
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 684 AGVPQGSNLGPLLYSIFSSDM 704
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S T I
Sbjct: 637 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 695
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 696 AGVPQGSNLGPLLYSIFSSDM 716
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 64.5 bits (150), Expect = 7e-11
Identities = 35/79 (44%), Positives = 45/79 (56%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW LL K+ +P+ K + S+L R + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEA 634
Query: 197 GVPQGSVLSPTLFILYIND 253
GVPQGSVL P L+ LY D
Sbjct: 635 GVPQGSVLGPILYTLYTAD 653
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I
Sbjct: 509 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 567
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 568 AGVPQGSNLGPILYSIFSSDM 588
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 684 AGVPQGSNLGPILYSIFSSDM 704
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 684 AGVPQGSNLGPILYSIFSSDM 704
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I
Sbjct: 587 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 645
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 646 AGVPQGSNLGPILYSIFSSDM 666
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVD-GDCSDTMTIN 193
AV LDI++AFDRVWH LL KL +P L + S+L R+ V G+ S I
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 194 AGVPQGSVLSPTLFILYINDM 256
AGVPQGS L P L+ ++ +DM
Sbjct: 684 AGVPQGSNLGPILYSIFSSDM 704
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = +2
Query: 26 LDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVP 205
LDI +AFDRVWH L K+ +P + S+L+GR V S + AGVP
Sbjct: 583 LDIREAFDRVWHIGLQLKIKQT-LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVP 641
Query: 206 QGSVLSPTLFILYINDM 256
QGSVL P L+ LY +DM
Sbjct: 642 QGSVLGPLLYCLYSHDM 658
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 196
A+ LD+A+AFDRVW LL K+ +P+ K + S+L + D S I A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEA 634
Query: 197 GVPQGSVLSPTLFILYIND 253
GVPQGSVL P L+ LY D
Sbjct: 635 GVPQGSVLGPILYTLYTAD 653
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 61.3 bits (142), Expect = 6e-10
Identities = 45/150 (30%), Positives = 70/150 (46%)
Frame = +2
Query: 17 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 196
AV +D+ +AFDRVWH L+SK+ P + S+L+ R V V S + A
Sbjct: 581 AVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
Query: 197 GVPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIGHQSLSQSVVQERRSKLVSE 376
GVPQGSVL P L+ ++ D+ + H A Y +L S ++
Sbjct: 640 GVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYS--SNCCNEAARG 697
Query: 377 VESSLGRVSKWGELNLVQFNPLKTQVCAFT 466
++ L ++ W + +++ NP KT FT
Sbjct: 698 LQEYLTTLAAWCKRWILKVNPQKTINPCFT 727
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/86 (33%), Positives = 50/86 (58%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V+LD ++AFDRV +++ +L + + K+I +F+ R ITV V S + + G
Sbjct: 573 VTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNG 632
Query: 200 VPQGSVLSPTLFILYINDMLSIDGMH 277
+PQGS +S LF++ N + +I +H
Sbjct: 633 IPQGSPISVILFLIAFNKLSNIISLH 658
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 58.4 bits (135), Expect = 4e-09
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 181
K ++ D +AFDRV A+L +L +GI L I +F+ RS V ++ S++
Sbjct: 575 KNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNS 634
Query: 182 MTINAGVPQGSVLSPTLFILYINDMLSIDGMH--CYANDSTGDARYIGHQSLSQSVVQER 355
++ G+PQGS LS LF++ I D+ I H Y + DA I + + + V+E+
Sbjct: 635 HILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDA-IIFTKIKNINTVREK 693
Query: 356 RSKLVSEVES 385
+++ E+ S
Sbjct: 694 FLEILQEINS 703
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +2
Query: 23 SLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGV 202
+LD++KAFD + H ++ L +YG P+G ++ + +G ++ DG S+ GV
Sbjct: 480 NLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGV 539
Query: 203 PQGSVLSPTLFILYINDML 259
QG LSP LF L ++ +L
Sbjct: 540 KQGDPLSPILFNLVMDRLL 558
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
++LD+ AF+ +L + + G+P+ + I ++ R + V + D + ++AG
Sbjct: 554 ITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTE-DGPRSHQVSAG 612
Query: 200 VPQGSVLSPTLFILYINDMLSID-----GMHCYAND 292
VPQGSVL P L+ + + +LSI +HC+A+D
Sbjct: 613 VPQGSVLGPILWNIMYDGILSISKPRGVELHCFADD 648
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/124 (27%), Positives = 61/124 (49%)
Frame = +2
Query: 14 LAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTIN 193
L +D AFD V A LS+L G E + W SF GR V+ + + +
Sbjct: 573 LGTFVDFKGAFDNVEWSAALSRLADLGCRE-MGLW-QSFFSGRR-AVIRSSSGTVEVPVT 629
Query: 194 AGVPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIGHQSLSQSVVQERRSKLVS 373
G PQGS+ P ++ + ++ +L +C + D + + S++V++E+ ++L+S
Sbjct: 630 RGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLL-VEGNSRAVLEEKGAQLMS 688
Query: 374 EVES 385
VE+
Sbjct: 689 IVET 692
>BT012431-1|AAS93702.1| 852|Drosophila melanogaster RH69719p
protein.
Length = 852
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>BT011466-1|AAR99124.1| 852|Drosophila melanogaster RE25460p
protein.
Length = 852
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>BT006026-1|AAO85560.1| 833|Drosophila melanogaster RE14149p
protein.
Length = 833
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AY089375-1|AAL90113.1| 1196|Drosophila melanogaster AT19506p
protein.
Length = 1196
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 113 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEP 9
C + GF A P PC++P SQQ P
Sbjct: 506 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQSP 540
>AF132163-1|AAD34751.1| 855|Drosophila melanogaster unknown
protein.
Length = 855
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014298-1581|AAF48017.1| 424|Drosophila melanogaster CG11105-PA,
isoform A protein.
Length = 424
Score = 27.9 bits (59), Expect = 7.2
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +2
Query: 158 VDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIG----HQ 325
+DGD S T T A G+ L+ +LY D +D D Y H
Sbjct: 170 MDGD-STTSTTTASAATGTTLNCN--VLYDYGAAEEDDDDQDEDDEDSDEEYRSFVCRHC 226
Query: 326 SLSQSVVQERRSKLVSEVESSLGRVSK 406
SQSVVQ+ RS S+ +S + SK
Sbjct: 227 QRSQSVVQQPRSNRRSQSQSKSRKRSK 253
>AE014298-1580|AAN09292.1| 488|Drosophila melanogaster CG11105-PB,
isoform B protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.2
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +2
Query: 158 VDGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCYANDSTGDARYIG----HQ 325
+DGD S T T A G+ L+ +LY D +D D Y H
Sbjct: 234 MDGD-STTSTTTASAATGTTLNCN--VLYDYGAAEEDDDDQDEDDEDSDEEYRSFVCRHC 290
Query: 326 SLSQSVVQERRSKLVSEVESSLGRVSK 406
SQSVVQ+ RS S+ +S + SK
Sbjct: 291 QRSQSVVQQPRSNRRSQSQSKSRKRSK 317
>AE014297-4333|AAN14159.1| 836|Drosophila melanogaster CG1709-PD,
isoform D protein.
Length = 836
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4332|AAN14158.1| 836|Drosophila melanogaster CG1709-PB,
isoform B protein.
Length = 836
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4331|AAN14157.1| 850|Drosophila melanogaster CG1709-PG,
isoform G protein.
Length = 850
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4330|AAN14156.1| 833|Drosophila melanogaster CG1709-PF,
isoform F protein.
Length = 833
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4329|AAN14155.1| 833|Drosophila melanogaster CG1709-PA,
isoform A protein.
Length = 833
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4328|AAN14154.1| 855|Drosophila melanogaster CG1709-PE,
isoform E protein.
Length = 855
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-4327|AAF56861.1| 855|Drosophila melanogaster CG1709-PC,
isoform C protein.
Length = 855
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 362 KLVSEVESSLGRVSKWGELNLVQFNPLKTQVCAF 463
+L + E++ VS+ GEL LVQF L V AF
Sbjct: 14 QLFLQSEAAYACVSELGELGLVQFRDLNPDVNAF 47
>AE014297-2383|AAF55448.2| 1534|Drosophila melanogaster CG14322-PA
protein.
Length = 1534
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 113 CRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEP 9
C + GF A P PC++P SQQ P
Sbjct: 844 CPNQHGFIPPTAQDSSPVTSPCQKPPSSPPSQQSP 878
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,672,227
Number of Sequences: 53049
Number of extensions: 537322
Number of successful extensions: 1631
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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