Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32433
(469 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 70 7e-13
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 65 3e-11
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 57 5e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 56 1e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 44 4e-05
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 31 0.41
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.54
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 1.3
AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical ... 29 1.7
AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical ... 29 1.7
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 28 2.9
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 28 2.9
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 27 5.1
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 27 5.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 27 6.7
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 6.7
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 27 6.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.7
Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical p... 27 8.9
Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical p... 27 8.9
Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical p... 27 8.9
Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical p... 27 8.9
Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein. 27 8.9
AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector ... 27 8.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 70.1 bits (164), Expect = 7e-13
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
+ LD +KAFDR+ H LL KL S + L W+ FL RS V + S G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 200 VPQGSVLSPTLFILYINDMLSI 265
VPQG+VLSP LF +Y+ND+ SI
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSI 98
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 64.9 bits (151), Expect = 3e-11
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 KAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGS 214
KAFD+V H LL KL +GI C W FL R+ +V V+ + I++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 215 VLSPTLFILYINDML 259
V P LF+++IN +L
Sbjct: 62 VSGPFLFLIFINSLL 76
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 57.2 bits (132), Expect = 5e-09
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 ALAVSLDIAKAFDRVWHRALLSKL-PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMT 187
A+ LD+ AFD+V + L + L + GI + W+ ++L R I D S T
Sbjct: 469 AIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHT 528
Query: 188 INAGVPQGSVLSPTLFILYINDM 256
+ GVPQGSV+SP LF Y+ DM
Sbjct: 529 LLGGVPQGSVISPNLFTFYLKDM 551
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Frame = +2
Query: 77 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS-DTMTINAGVPQGSVLSPTLFILYIND 253
KL +G+ C W FL+ R+ +V ++ S ++ I++GVPQGSV P LFIL+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 254 MLSID-----GMHCYAND 292
+L ID + C+A+D
Sbjct: 899 LL-IDLAPTINISCFADD 915
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC-SDTMTINA 196
+ ++ AFD+V H L+SKL + + L W + ++ +V V+ S+
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 197 GVPQGSVLSPTLFILYINDML 259
G P+GS +F+++IN +L
Sbjct: 950 GAPRGSESRQFMFLVFINSLL 970
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.41
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 255 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 169
+SL KS GE T+PCGTP + SE+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 30.7 bits (66), Expect = 0.54
Identities = 22/72 (30%), Positives = 29/72 (40%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V +D KAFD V H+A+ L G E + T T+ + G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYK-NCTTNFTPFLRPITVPVTKG 98
Query: 200 VPQGSVLSPTLF 235
V QG +SP LF
Sbjct: 99 VRQGDPISPNLF 110
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 209 GSVLSPTLFILYINDMLSIDGMHCYANDSTGD--ARYIGHQSLSQSVVQERRSKLVSEVE 382
G SP + + D S+ + Y N TGD +Y H SL + ++R KLV++ +
Sbjct: 1975 GKCRSPDKRVFFATDDGSLHSVGWYKNSKTGDLIQKYRAH-SLHSDIGKKRILKLVADAK 2033
Query: 383 SSL 391
+ L
Sbjct: 2034 NDL 2036
>AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical
protein C17E7.9a protein.
Length = 285
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 34 REGLRQGLA*GTSVEATILRNPR 102
RE + +GLA GT V T+ R PR
Sbjct: 246 RENVHEGLADGTQVTTTVFRGPR 268
>AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical
protein C17E7.9b protein.
Length = 257
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 34 REGLRQGLA*GTSVEATILRNPR 102
RE + +GLA GT V T+ R PR
Sbjct: 218 RENVHEGLADGTQVTTTVFRGPR 240
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 174 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 275
L+P P+TL F ++ C P F+ + C + C
Sbjct: 17 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 50
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 174 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMAC 275
L+P P+TL F ++ C P F+ + C + C
Sbjct: 90 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDC 123
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 576
Query: 200 VPQGSVLSPTLF 235
V QG +SP LF
Sbjct: 577 VRQGDPISPNLF 588
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 689 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 747
Query: 200 VPQGSVLSPTLF 235
V QG +SP LF
Sbjct: 748 VRQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 20 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAG 199
V +D KAFD V H+A+ L G +G + T + + G
Sbjct: 428 VFIDFKKAFDSVEHQAIWKSLDEQG-ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKG 486
Query: 200 VPQGSVLSPTLF 235
V QG +SP LF
Sbjct: 487 VRQGDPISPNLF 498
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 286 RIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVYNDRDAPPIQKASDPLAE 107
RI+ NR V DI+ K GE LWN+ G+ V + P I +D L
Sbjct: 2844 RISKDLYNRDFVGDIESLKLHGEPIGLWNSREKGN----TNVNGAQKKPKITDNADELVV 2899
Query: 106 TL 101
+L
Sbjct: 2900 SL 2901
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 286 RIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVYNDRDAPPIQKASDPLAE 107
RI+ NR V DI+ K GE LWN+ G+ V + P I +D L
Sbjct: 2844 RISKDLYNRDFVGDIESLKLHGEPIGLWNSREKGN----TNVNGAQKKPKITDNADELVV 2899
Query: 106 TL 101
+L
Sbjct: 2900 SL 2901
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 293 STGDARYIGHQSLSQSVVQERRSKLVSEVESSLGRVSK 406
S GD R + SL + V+Q+ R++ SE S++ S+
Sbjct: 205 SIGDGRTSNNTSLQEPVIQDTRNRNRSESSSTMSSQSR 242
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 164 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRP 3
R +RP + P R+ C P G + P PC+RP Q Q +P+P
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQP 134
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 164 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRP 3
R +RP + P R+ C P G + P PC+RP Q Q +P+P
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQP 134
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.1 bits (57), Expect = 6.7
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 164 RLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRP 3
R +RP + P R+ C P G + P PC+RP Q Q +P+P
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQP 134
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 255 MSLIYRMKSVGE--STEPCGTPALMVMVSEQSP 163
++L+Y + V STEPC + ++MV+E P
Sbjct: 10 LTLLYTLSPVSSQNSTEPCDSDKCLLMVAELGP 42
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 286 RIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVYNDRDAPPIQKASDPLAE 107
RI+ NR V DI+ K GE LWN+ G+ V + P I +D L
Sbjct: 658 RISKDLYNRDFVGDIESLKLHGEPIGLWNSREKGN----TNVNGAQKKPKITDNADELVV 713
Query: 106 TL 101
+L
Sbjct: 714 SL 715
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 27.1 bits (57), Expect = 6.7
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -3
Query: 182 WYQNSHRLQRP*CSAHPKS*RSTCRDPRGFRKMVASTEVPYARPCRRPSRYQGSQQEPRP 3
W Q H R H + R+ DPR + +A VPY+R +R Y S+ P+P
Sbjct: 327 WEQRVHADGRVFFIDHNRR-RTQWEDPRFENENIAGPAVPYSRDYKRKVEYLRSRL-PKP 384
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 286 RIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVYNDRDAPPIQKASDPLAE 107
RI+ NR V DI+ K GE LWN+ G+ V + P I +D L
Sbjct: 2844 RISKDLYNRDFVGDIESLKLHGEPIGLWNSREKGN----TNVNGAQKKPKITDNADELVV 2899
Query: 106 TL 101
+L
Sbjct: 2900 SL 2901
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -1
Query: 286 RIAMHAINRQHVIDIQDEKRGGEHRTLWNASVNGHGIRTVTVYNDRDAPPIQKASDPLAE 107
RI+ NR V DI+ K GE LWN+ G+ V + P I +D L
Sbjct: 2844 RISKDLYNRDFVGDIESLKLHGEPIGLWNSREKGN----TNVNGAQKKPKITDNADELVV 2899
Query: 106 TL 101
+L
Sbjct: 2900 SL 2901
>Z81124-10|CAH60752.1| 241|Caenorhabditis elegans Hypothetical
protein T21B4.15 protein.
Length = 241
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 269 GMHCYANDSTGDARYIGHQSLSQSVVQERRSKLVSEVESSLGRVSKWGELNLVQFNPL 442
G H S + + L QSV QE+ +L + +S R ++ + L+ P+
Sbjct: 134 GSHSEGLLSIAQPNQVDEEQLKQSVAQEKLEELTMRIGNSYHRATQKRQTILIDIAPM 191
>Z81077-14|CAN99679.1| 662|Caenorhabditis elegans Hypothetical
protein F36A2.1c protein.
Length = 662
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 47 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 166
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z81077-2|CAD56583.2| 656|Caenorhabditis elegans Hypothetical
protein F36A2.1b protein.
Length = 656
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 47 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 166
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z81077-1|CAB03066.2| 658|Caenorhabditis elegans Hypothetical
protein F36A2.1a protein.
Length = 658
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 47 DRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 166
D V+ R K P+ E + WI + D SI ++VDG
Sbjct: 7 DVVYSRLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDG 46
>Z70684-11|CAA94604.1| 1141|Caenorhabditis elegans Hypothetical
protein F28D1.10 protein.
Length = 1141
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 258 CLLMACIAMRMTARGMRDISAIRVSLKA 341
CLLM +A+ + GM D+S+ + S++A
Sbjct: 1006 CLLMVAVAICIPRIGMSDLSSYKPSIQA 1033
>Z70682-10|CAA94588.1| 1141|Caenorhabditis elegans Hypothetical
protein F28D1.10 protein.
Length = 1141
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 258 CLLMACIAMRMTARGMRDISAIRVSLKA 341
CLLM +A+ + GM D+S+ + S++A
Sbjct: 1006 CLLMVAVAICIPRIGMSDLSSYKPSIQA 1033
>Z70210-1|CAA94149.1| 176|Caenorhabditis elegans Hypothetical
protein K08H2.1 protein.
Length = 176
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 419 NLVQFNPLKTQVCAF 463
NLVQ +PLKT +C+F
Sbjct: 42 NLVQPHPLKTSICSF 56
>U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical
protein F44A2.5a protein.
Length = 118
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 171 QSPSTTTVMLRPSKKLAIHLQRPSGIP*DGSFDRSALCQTLS 46
++P+TT +P+ + A+ + RP G+ DGS +A+ T S
Sbjct: 15 KAPATTK---KPTNRPAMQIYRPPGLRSDGSSSTTAVTTTSS 53
>U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical
protein F44A2.5b protein.
Length = 390
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 171 QSPSTTTVMLRPSKKLAIHLQRPSGIP*DGSFDRSALCQTLS 46
++P+TT +P+ + A+ + RP G+ DGS +A+ T S
Sbjct: 15 KAPATTK---KPTNRPAMQIYRPPGLRSDGSSSTTAVTTTSS 53
>AF440520-1|AAL34108.1| 172|Caenorhabditis elegans SKR-21 protein.
Length = 172
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 419 NLVQFNPLKTQVCAF 463
NLVQ +PLKT +C+F
Sbjct: 38 NLVQPHPLKTSICSF 52
>AB073210-1|BAB70473.1| 1141|Caenorhabditis elegans rac effector
protein.
Length = 1141
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 258 CLLMACIAMRMTARGMRDISAIRVSLKA 341
CLLM +A+ + GM D+S+ + S++A
Sbjct: 1006 CLLMVAVAICIPRIGMSDLSSYKPSIQA 1033
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,729,250
Number of Sequences: 27780
Number of extensions: 258969
Number of successful extensions: 781
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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