Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32422
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z99286-3|CAH60794.1|  320|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr...    30   2.1  
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase...    30   2.1  
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi...    30   2.1  
U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    29   4.9  
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical...    29   4.9  
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical...    29   4.9  
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical...    29   4.9  
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct...    29   4.9  
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct...    29   4.9  
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct...    29   4.9  
Z81509-8|CAB04157.2|  310|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF098999-5|AAC68725.1|  102|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +3

Query: 357 KIFPYFYWHRKSIRTCKCLLCLKLMFNPKNCSMALRVFFGFLRVVDIIETTLTV 518
           K+  Y +W   +I  CK +  + +++N    S+ +  +   + V+DI+ T LTV
Sbjct: 219 KVQSYIHWQTLTIFVCKSMAIVLVIYNNTFGSLPIGAYTFLILVMDIVTTPLTV 272


>Z99286-3|CAH60794.1|  320|Caenorhabditis elegans Hypothetical
           protein Y7A9C.9 protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/54 (24%), Positives = 29/54 (53%)
 Frame = +3

Query: 357 KIFPYFYWHRKSIRTCKCLLCLKLMFNPKNCSMALRVFFGFLRVVDIIETTLTV 518
           K+  Y +W   +I  CK +  + +++N    S+++  +   + ++DI+ T L V
Sbjct: 231 KVQNYIHWQTLTIFVCKLINIVVVIYNHTFGSLSIAEYTVVIVIIDIVTTPLIV 284


>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
           protein ZK1067.1 protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
 Frame = -2

Query: 765 CKTCKCIMYSSCPRGCIAHSSTRETDVERCRTRRPIVPLCRSWR---ALACTSSLKWNAS 595
           CKT K +   +C   C      R     +C    P    C        L C     +N+ 
Sbjct: 540 CKTWKSV--GTCVEKCDTKGFLRNQTSMKCERCSPECETCNGLGELDCLTCRHKTLYNSD 597

Query: 594 MSNVFSCVQPAPSSYKTLLRQNCE 523
             N   CV   P S+    +  CE
Sbjct: 598 FGNRMECVHDCPVSHFPTQKNVCE 621


>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
           protein.
          Length = 1323

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
 Frame = -2

Query: 765 CKTCKCIMYSSCPRGCIAHSSTRETDVERCRTRRPIVPLCRSWR---ALACTSSLKWNAS 595
           CKT K +   +C   C      R     +C    P    C        L C     +N+ 
Sbjct: 540 CKTWKSV--GTCVEKCDTKGFLRNQTSMKCERCSPECETCNGLGELDCLTCRHKTLYNSD 597

Query: 594 MSNVFSCVQPAPSSYKTLLRQNCE 523
             N   CV   P S+    +  CE
Sbjct: 598 FGNRMECVHDCPVSHFPTQKNVCE 621


>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
           kinase protein.
          Length = 1374

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
 Frame = -2

Query: 765 CKTCKCIMYSSCPRGCIAHSSTRETDVERCRTRRPIVPLCRSWR---ALACTSSLKWNAS 595
           CKT K +   +C   C      R     +C    P    C        L C     +N+ 
Sbjct: 591 CKTWKSV--GTCVEKCDTKGFLRNQTSMKCERCSPECETCNGLGELDCLTCRHKTLYNSD 648

Query: 594 MSNVFSCVQPAPSSYKTLLRQNCE 523
             N   CV   P S+    +  CE
Sbjct: 649 FGNRMECVHDCPVSHFPTQKNVCE 672


>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 666 SAFGSVRHLSLSYLSERCIRVDSC 737
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 666 SAFGSVRHLSLSYLSERCIRVDSC 737
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19c protein.
          Length = 1131

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19b protein.
          Length = 1118

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
           protein Y51A2D.19a protein.
          Length = 1140

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1c protein.
          Length = 1131

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1b protein.
          Length = 1118

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans
           large-conductance calcium-activatedpotassium channel
           SLO-1a protein.
          Length = 1140

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 343 IQCTNKWISYNRLKRFRLHQYPSVLTFRNILTNDKSIGF*SIFTL 209
           I     W+ +  L+  RL   P +L + NIL    SI    + T+
Sbjct: 226 IYLQRNWLGFRFLRALRLMTVPDILQYLNILKTSSSIRLTQLVTI 270


>Z81509-8|CAB04157.2|  310|Caenorhabditis elegans Hypothetical
           protein F21A3.3 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
 Frame = -2

Query: 756 CKC---IMYSSCPRGC--IAHSSTRETDVERCRTRRPIVPLCRSWRALAC 622
           C+C   +M   C R C  +  S  R    ERC   RPI P      AL+C
Sbjct: 53  CECPFGLMGRRCQRPCQDVYKSCARWKSEERCHWTRPISPFFADNCALSC 102


>AF098999-5|AAC68725.1|  102|Caenorhabditis elegans Hypothetical
           protein W04C9.2 protein.
          Length = 102

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 609 KWNASMSNVFSCVQPAPSSYKTL 541
           KWN+++ +VF+ ++  PSS  T+
Sbjct: 72  KWNSAVDSVFTTIENVPSSVNTV 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,196,895
Number of Sequences: 27780
Number of extensions: 351240
Number of successful extensions: 906
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)