Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32406
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M65178-1|AAA28738.1|  606|Drosophila melanogaster oskar protein.       29   8.2  
M63492-1|AAA28739.1|  606|Drosophila melanogaster maternal effec...    29   8.2  
AY058560-1|AAL13789.1|  468|Drosophila melanogaster LD24944p pro...    29   8.2  
AE014297-839|AAS65129.1|  468|Drosophila melanogaster CG10901-PC...    29   8.2  
AE014297-838|AAF54306.1|  606|Drosophila melanogaster CG10901-PA...    29   8.2  

>M65178-1|AAA28738.1|  606|Drosophila melanogaster oskar protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 506 HT*SCRPNGKQSTSL*TRHYGFSRSLHGAFRYLKHRSPSSPNPSLATKGS 655
           H  SCR   +++     RH G           +K R   +P P++ T G+
Sbjct: 355 HQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTSGT 404


>M63492-1|AAA28739.1|  606|Drosophila melanogaster maternal effect
           protein protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 506 HT*SCRPNGKQSTSL*TRHYGFSRSLHGAFRYLKHRSPSSPNPSLATKGS 655
           H  SCR   +++     RH G           +K R   +P P++ T G+
Sbjct: 355 HQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTSGT 404


>AY058560-1|AAL13789.1|  468|Drosophila melanogaster LD24944p
           protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 506 HT*SCRPNGKQSTSL*TRHYGFSRSLHGAFRYLKHRSPSSPNPSLATKGS 655
           H  SCR   +++     RH G           +K R   +P P++ T G+
Sbjct: 217 HQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTSGT 266


>AE014297-839|AAS65129.1|  468|Drosophila melanogaster CG10901-PC,
           isoform C protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 506 HT*SCRPNGKQSTSL*TRHYGFSRSLHGAFRYLKHRSPSSPNPSLATKGS 655
           H  SCR   +++     RH G           +K R   +P P++ T G+
Sbjct: 217 HQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTSGT 266


>AE014297-838|AAF54306.1|  606|Drosophila melanogaster CG10901-PA,
           isoform A protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 506 HT*SCRPNGKQSTSL*TRHYGFSRSLHGAFRYLKHRSPSSPNPSLATKGS 655
           H  SCR   +++     RH G           +K R   +P P++ T G+
Sbjct: 355 HQPSCRTQSQKTEPTENRHLGIFVHPFNGMNIMKRRHEMTPTPTILTSGT 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,659,758
Number of Sequences: 53049
Number of extensions: 564834
Number of successful extensions: 1255
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)