Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32399
         (621 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036788-1|AAH36788.2|  494|Homo sapiens integrin, beta-like 1 (...    30   7.6  
AL355807-1|CAI14550.1|  494|Homo sapiens integrin, beta-like 1 (...    30   7.6  
AL160153-1|CAH73400.1|  494|Homo sapiens integrin, beta-like 1 (...    30   7.6  
AL139800-1|CAH71455.1|  494|Homo sapiens integrin, beta-like 1 (...    30   7.6  
AF072752-1|AAD17666.1|  494|Homo sapiens ten integrin EGF-like r...    30   7.6  
AE014302-1|AAN16024.1|  494|Homo sapiens ITGBL1 protein.               30   7.6  

>BC036788-1|AAH36788.2|  494|Homo sapiens integrin, beta-like 1
           (with EGF-like repeat domains) protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


>AL355807-1|CAI14550.1|  494|Homo sapiens integrin, beta-like 1
           (with EGF-like repeat domains) protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


>AL160153-1|CAH73400.1|  494|Homo sapiens integrin, beta-like 1
           (with EGF-like repeat domains) protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


>AL139800-1|CAH71455.1|  494|Homo sapiens integrin, beta-like 1
           (with EGF-like repeat domains) protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


>AF072752-1|AAD17666.1|  494|Homo sapiens ten integrin EGF-like
           repeat domains protein precursor protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


>AE014302-1|AAN16024.1|  494|Homo sapiens ITGBL1 protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 392 RAHSSCRNALLLHSRNRQDGGTCLCHYT 475
           RA      A L H R R D G C+CH T
Sbjct: 52  RAPGQPPGAALCHGRGRCDCGVCICHVT 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,750,886
Number of Sequences: 237096
Number of extensions: 2023733
Number of successful extensions: 3146
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3146
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)