Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32399
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77661-3|CAB01187.2|  264|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF106582-7|ABD94096.1|  806|Caenorhabditis elegans Hypothetical ...    27   8.2  
AF106582-6|ABD94095.1|  834|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z77661-3|CAB01187.2|  264|Caenorhabditis elegans Hypothetical
           protein F40G12.4 protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 56  LLFCLKIHCLFV-YYCKLFKNTLPICIPLQIISLKACQCFYEHTAAISSK 202
           L+FCL I CLF+ Y+C+       I   L+I+S +   CF++   ++  K
Sbjct: 4   LIFCLAIFCLFLSYHCE------GIPFHLEILSDRTKNCFFKFFESVLLK 47


>Z78065-4|CAB01514.2|  344|Caenorhabditis elegans Hypothetical
           protein T09E8.5 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = +2

Query: 95  YCKLFKNTLPICIPLQIISLKACQCFYEHTAAISSKRIIGTYKSEHFEVCLFVFL 259
           YC  +       + + +  L     F+  T  I++  II  + S H  V +++FL
Sbjct: 47  YCLTYMQVASFIVEINVTWLVPAYHFFPLTGGIAAGEIIRKFVSNHTGVTIWIFL 101


>AF106582-7|ABD94096.1|  806|Caenorhabditis elegans Hypothetical
           protein W05F2.4b protein.
          Length = 806

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 220 IGTYNSFRRYRRGMLVKTLTSFQ 152
           IG YN  RRY RG  ++T  SF+
Sbjct: 681 IGIYNDDRRYSRGSELETSASFR 703


>AF106582-6|ABD94095.1|  834|Caenorhabditis elegans Hypothetical
           protein W05F2.4a protein.
          Length = 834

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 220 IGTYNSFRRYRRGMLVKTLTSFQ 152
           IG YN  RRY RG  ++T  SF+
Sbjct: 709 IGIYNDDRRYSRGSELETSASFR 731


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,613,861
Number of Sequences: 27780
Number of extensions: 315956
Number of successful extensions: 653
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)