Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32397
(460 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 216 3e-56
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 216 3e-56
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 216 3e-56
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 216 3e-56
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 211 7e-55
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 7e-19
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.20
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 1.4
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 1.4
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 1.4
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 1.4
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 1.9
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 1.9
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 1.9
M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein. 29 7.7
M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte a... 29 7.7
BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibilit... 29 7.7
BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein. 29 7.7
AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen pr... 29 7.7
AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen pr... 29 7.7
AY458845-1|AAS13443.1| 593|Homo sapiens KRAB-domain-containing ... 29 7.7
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 216 bits (527), Expect = 3e-56
Identities = 100/118 (84%), Positives = 108/118 (91%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYXVQVSDMSLQDYISVKEKYAKYLPHSXGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS VQ++D+SLQDYI+VKEKYAKYLPHS GRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 460
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDST
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 216 bits (527), Expect = 3e-56
Identities = 100/118 (84%), Positives = 108/118 (91%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYXVQVSDMSLQDYISVKEKYAKYLPHSXGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS VQ++D+SLQDYI+VKEKYAKYLPHS GRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 460
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDST
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 216 bits (527), Expect = 3e-56
Identities = 100/118 (84%), Positives = 108/118 (91%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYXVQVSDMSLQDYISVKEKYAKYLPHSXGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS VQ++D+SLQDYI+VKEKYAKYLPHS GRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 460
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDST
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 216 bits (527), Expect = 3e-56
Identities = 100/118 (84%), Positives = 108/118 (91%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYXVQVSDMSLQDYISVKEKYAKYLPHSXGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS VQ++D+SLQDYI+VKEKYAKYLPHS GRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 460
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDST
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 211 bits (516), Expect = 7e-55
Identities = 98/118 (83%), Positives = 106/118 (89%)
Frame = +2
Query: 107 PQAADIPEIKLFGRWSCYXVQVSDMSLQDYISVKEKYAKYLPHSXGRYAHKRFRKAQCPI 286
P A+ P+IKLFG+WS VQ++D+SLQDYI+VKEKYAKYLPHS GRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 287 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 460
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDST
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 7e-19
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 272 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 427
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.20
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 243
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 243
C+C++R L GA GLYG C TC
Sbjct: 686 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 716
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 1.4
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +2
Query: 29 TNHGRGRTGMTTYAXAGSVVVETMSLPQAA-DIPEI--KLFGRWSCYXVQVSDMSLQDYI 199
T+ R + + T A SV + SLP PE ++ R + Q+++
Sbjct: 983 TSSSRPGSRVPTEPPATSVAARSSSLPSGRWGRPEAHRRVEARPRLRNTGWTCQECQEWV 1042
Query: 200 SVKEKYAKYLPHSXGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
+E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1043 PDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.5 bits (68), Expect = 1.4
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +2
Query: 29 TNHGRGRTGMTTYAXAGSVVVETMSLPQAA-DIPEI--KLFGRWSCYXVQVSDMSLQDYI 199
T+ R + + T A SV + SLP PE ++ R + Q+++
Sbjct: 933 TSSSRPGSRVPTEPPATSVAARSSSLPSGRWGRPEAHRRVEARPRLRNTGWTCQECQEWV 992
Query: 200 SVKEKYAKYLPHSXGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
+E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 993 PDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.5 bits (68), Expect = 1.4
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +2
Query: 29 TNHGRGRTGMTTYAXAGSVVVETMSLPQAA-DIPEI--KLFGRWSCYXVQVSDMSLQDYI 199
T+ R + + T A SV + SLP PE ++ R + Q+++
Sbjct: 933 TSSSRPGSRVPTEPPATSVAARSSSLPSGRWGRPEAHRRVEARPRLRNTGWTCQECQEWV 992
Query: 200 SVKEKYAKYLPHSXGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
+E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 993 PDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 31.5 bits (68), Expect = 1.4
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +2
Query: 29 TNHGRGRTGMTTYAXAGSVVVETMSLPQAA-DIPEI--KLFGRWSCYXVQVSDMSLQDYI 199
T+ R + + T A SV + SLP PE ++ R + Q+++
Sbjct: 933 TSSSRPGSRVPTEPPATSVAARSSSLPSGRWGRPEAHRRVEARPRLRNTGWTCQECQEWV 992
Query: 200 SVKEKYAKYLPHSXGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 331
+E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 993 PDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVH 249
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 243
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVH 249
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 243
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVH 249
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 335 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 243
C+C++R L GA GLYG C TC
Sbjct: 523 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 553
>M83664-1|AAA59837.1| 258|Homo sapiens HLA-DPB1 protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>M28200-1|AAA53195.1| 258|Homo sapiens MHC class II lymphocyte
antigen beta chain protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>BT019780-1|AAV38583.1| 258|Homo sapiens major histocompatibility
complex, class II, DP beta 1 protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>BC013184-1|AAH13184.1| 258|Homo sapiens HLA-DPB1 protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>AY804143-1|AAW78748.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>AY804133-1|AAW78738.1| 258|Homo sapiens MHC class II antigen
protein.
Length = 258
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 TYAXAGSVVVETMSLPQAADIPEIKLF-GRWSCYXVQVSDMSLQDYISVKEKYAKY 226
T A ++V S+ Q PE ++ GR CY + L+ YI +E+YA++
Sbjct: 12 TVALTALLMVLLTSVVQGRATPENYVYQGRQECYAFNGTQRFLERYIYNREEYARF 67
>AY458845-1|AAS13443.1| 593|Homo sapiens KRAB-domain-containing
zinc finger protein protein.
Length = 593
Score = 29.1 bits (62), Expect = 7.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 85 GCGNHVFTTSRRHS*NQAFRQMELLXC 165
GCG + S+ HS +A+R+ EL C
Sbjct: 403 GCGKRFYMNSQGHSHQRAYREEELYKC 429
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,816,035
Number of Sequences: 237096
Number of extensions: 1300250
Number of successful extensions: 5991
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5991
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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