Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32397
(460 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 0.91
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 0.91
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 0.91
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 0.91
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 0.91
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 3.7
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 21 4.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 4.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 4.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 4.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 4.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.5
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 206 KEKYAKYLPHSXGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 358
+ Y KY S R + R R + I+ L+N + + NN KKL I
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 206 KEKYAKYLPHSXGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 358
+ Y KY S R + R R + I+ L+N + + NN KKL I
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 206 KEKYAKYLPHSXGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 358
+ Y KY S R + R R + I+ L+N + + NN KKL I
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 206 KEKYAKYLPHSXGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 358
+ Y KY S R + R R + I+ L+N + + NN KKL I
Sbjct: 53 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 105
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 206 KEKYAKYLPHSXGRYAHK--RFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI 358
+ Y KY S R + R R + I+ L+N + + NN KKL I
Sbjct: 286 ENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNI 338
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.8 bits (44), Expect = 3.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 185 ETYQRLAHXSNSICRKA*FQECRRLVVKTWFP 90
+ Y+RL H N I ++ F RL T+ P
Sbjct: 240 QVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCP 271
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 21.4 bits (43), Expect = 4.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 103 FTTSRRHS*NQAFRQMELLXCASL*YVSAGLHFR*REVRXIF 228
FTT + S + FR+ + L A S+ LH +V+ F
Sbjct: 16 FTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWF 57
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 356 IVKHAFEIIHLLTGENPLQVLVTAII 433
+++HAFEI +L P+ +++ I
Sbjct: 217 LIEHAFEISTMLFFVLPMTIIIVLYI 242
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 4.8
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 324 RPCIIREFVRRSTIGHWAL 268
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 4.8
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 324 RPCIIREFVRRSTIGHWAL 268
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 4.8
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = -2
Query: 324 RPCIIREFVRRSTIGHWAL 268
+ +++E +R+ GHW +
Sbjct: 63 KKALMKERIRQKAAGHWVI 81
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 355 YCQTCV*NYSLVNWRKP 405
+CQ S + WRKP
Sbjct: 24 FCQPTQRTMSKIQWRKP 40
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 198 FPLKRSTXNIYLIXLAGMHTSVSVK 272
FP + N + LA HT +SVK
Sbjct: 301 FPPTPGSFNFSMAALATEHTPLSVK 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,559
Number of Sequences: 438
Number of extensions: 2600
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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