Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32394
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095202-1|AAM12295.1|  786|Drosophila melanogaster RE48040p pro...    30   2.3  
AE014298-2953|AAF45370.2|  786|Drosophila melanogaster CG9565-PA...    30   2.3  
BT001683-1|AAN71438.1|  295|Drosophila melanogaster RE56765p pro...    29   4.1  
AE014297-3410|AAF56206.1|  295|Drosophila melanogaster CG13599-P...    29   4.1  

>AY095202-1|AAM12295.1|  786|Drosophila melanogaster RE48040p
           protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 493 GHDKRNS--HVVPXFSSGSMMPTVDTYSLKRNNNTVLQQSEFIMYFLK 356
           G D +NS  HV+     G  +PT D Y+ K +N+  +  +E+I Y  K
Sbjct: 251 GEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKV-LNEYIEYMTK 297


>AE014298-2953|AAF45370.2|  786|Drosophila melanogaster CG9565-PA
           protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 493 GHDKRNS--HVVPXFSSGSMMPTVDTYSLKRNNNTVLQQSEFIMYFLK 356
           G D +NS  HV+     G  +PT D Y+ K +N+  +  +E+I Y  K
Sbjct: 251 GEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKV-LNEYIEYMTK 297


>BT001683-1|AAN71438.1|  295|Drosophila melanogaster RE56765p
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 552 KHVITDSPDPCTGLFRYLKHRSPSSPNPVAC 644
           KH+++  P  C  +  +L H S ++PN + C
Sbjct: 200 KHILSQLPRSCKNIHLHLLHCSENTPNELRC 230


>AE014297-3410|AAF56206.1|  295|Drosophila melanogaster CG13599-PA
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 552 KHVITDSPDPCTGLFRYLKHRSPSSPNPVAC 644
           KH+++  P  C  +  +L H S ++PN + C
Sbjct: 200 KHILSQLPRSCKNIHLHLLHCSENTPNELRC 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,419,302
Number of Sequences: 53049
Number of extensions: 520106
Number of successful extensions: 1195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)