Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32386
         (353 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97054-6|CAI42650.1|  379|Homo sapiens RIB43A domain with coiled...    33   0.33 
BC036767-1|AAH36767.1|  379|Homo sapiens RIB43A domain with coil...    33   0.33 
BC063117-1|AAH63117.1|  573|Homo sapiens ARHGEF12 protein protein.     29   5.4  
AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide exch...    29   5.4  
AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein.     29   5.4  

>Z97054-6|CAI42650.1|  379|Homo sapiens RIB43A domain with
           coiled-coils 1 protein.
          Length = 379

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 287 NYVSFLSRRRNFINSPYIRQAASIEDSQRADIACDQASVGGQCSCLEIRRQRCER 123
           NY   LS +            A +E+S RA + C  A+     + ++  RQRCER
Sbjct: 179 NYTDALSNQLRLAMDAQATHLARLEESCRAAMMCAMANANKAQAAVQAGRQRCER 233


>BC036767-1|AAH36767.1|  379|Homo sapiens RIB43A domain with
           coiled-coils 1 protein.
          Length = 379

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -1

Query: 287 NYVSFLSRRRNFINSPYIRQAASIEDSQRADIACDQASVGGQCSCLEIRRQRCER 123
           NY   LS +            A +E+S RA + C  A+     + ++  RQRCER
Sbjct: 179 NYTDALSNQLRLAMDAQATHLARLEESCRAAMMCAMANANKAQAAVQAGRQRCER 233


>BC063117-1|AAH63117.1|  573|Homo sapiens ARHGEF12 protein protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 302 QNPPTNYVSFLSRRRNFINSPYIRQAASIEDSQRADIACDQASVGGQCSCLE 147
           +NP  +     +  ++ + SP  R A  I  ++  D   +   + GQCSC +
Sbjct: 303 ENPEKSETIQDTDTQSLVGSPSTRIAPHIIGAEDDDFGTEHEQINGQCSCFQ 354


>AF180681-1|AAF36817.1| 1544|Homo sapiens guanine nucleotide
           exchange factor protein.
          Length = 1544

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 302 QNPPTNYVSFLSRRRNFINSPYIRQAASIEDSQRADIACDQASVGGQCSCLE 147
           +NP  +     +  ++ + SP  R A  I  ++  D   +   + GQCSC +
Sbjct: 322 ENPEKSETIQDTDTQSLVGSPSTRIAPHIIGAEDDDFGTEHEQINGQCSCFQ 373


>AB002380-1|BAA20836.2| 1443|Homo sapiens KIAA0382 protein protein.
          Length = 1443

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 302 QNPPTNYVSFLSRRRNFINSPYIRQAASIEDSQRADIACDQASVGGQCSCLE 147
           +NP  +     +  ++ + SP  R A  I  ++  D   +   + GQCSC +
Sbjct: 221 ENPEKSETIQDTDTQSLVGSPSTRIAPHIIGAEDDDFGTEHEQINGQCSCFQ 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,532,787
Number of Sequences: 237096
Number of extensions: 1108751
Number of successful extensions: 2978
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2978
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)