Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32386
(353 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 1.2
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 1.2
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 27 2.8
AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical ... 27 2.8
AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical ... 27 2.8
Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical pr... 26 6.6
AF039052-11|AAF98632.1| 583|Caenorhabditis elegans Hypothetical... 26 6.6
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 26 6.6
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical pr... 26 8.7
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 227 AASIEDSQRADIACDQASVGGQCSC 153
++S + +Q A +AC QA QCSC
Sbjct: 338 SSSCQAAQPATVACQQAPQSNQCSC 362
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 227 AASIEDSQRADIACDQASVGGQCSC 153
++S + +Q A +AC QA QCSC
Sbjct: 338 SSSCQAAQPATVACQQAPQSNQCSC 362
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 74 NQHEQTIERLRTNLKTTSRIAACESLGKSIDHRPMPDHKLY 196
+Q+ Q +ER +K S + A LG S+D P+ K +
Sbjct: 425 SQNSQLLERTLNAVKKISELIATSKLGNSLDSIPVETLKTF 465
>AF047661-2|AAK71389.1| 886|Caenorhabditis elegans Hypothetical
protein M70.3b protein.
Length = 886
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 74 NQHEQTIERLRTNLKTTSRIAACESLGKSIDHRPMPDHKLY 196
+Q+ Q +ER +K S + A LG S+D P+ K +
Sbjct: 415 SQNSQLLERTLNAVKKISELIATSKLGNSLDSIPVETLKTF 455
>AF047661-1|AAK71388.2| 915|Caenorhabditis elegans Hypothetical
protein M70.3a protein.
Length = 915
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 74 NQHEQTIERLRTNLKTTSRIAACESLGKSIDHRPMPDHKLY 196
+Q+ Q +ER +K S + A LG S+D P+ K +
Sbjct: 444 SQNSQLLERTLNAVKKISELIATSKLGNSLDSIPVETLKTF 484
>Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical
protein F21A3.3 protein.
Length = 310
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 198 CPLGILNRGCLPDIRAIYKIPPSREK*DVICWWVLP 305
CP G++ R C + +YK +R K + C W P
Sbjct: 55 CPFGLMGRRCQRPCQDVYK-SCARWKSEERCHWTRP 89
>AF039052-11|AAF98632.1| 583|Caenorhabditis elegans Hypothetical
protein T22D1.11 protein.
Length = 583
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 28 PRTRRETRGVL-ATATKPTRTNNRTPSNEPQNYLSHRCLRIS 150
P + G+L AT P +N + S PQ ++ CL I+
Sbjct: 62 PMAAEKWEGILNATEYGPACMSNSSTSKSPQKWIDEDCLHIN 103
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 266 EREMRRNLLVGFAKFCTEICSL 331
EREMRR L F FC ++ L
Sbjct: 769 EREMRRRLNAAFNSFCEKVSRL 790
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 332 SSCKSQCKTWQNPPTNYVSFLSRRRNFINSPYIRQAASIEDSQRADIACD 183
SSC S C + + N +S +F+ S R+ D QRAD +CD
Sbjct: 534 SSCGSSCSSNADSEANQLSRAQSLDDFVLSDEDRKNTIHLDLQRAD-SCD 582
>Z69794-1|CAA93679.2| 663|Caenorhabditis elegans Hypothetical
protein R03G8.1 protein.
Length = 663
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 50 AEFSRPRPNQHEQTIERLRTNLKTTSRIAACESLGKSID 166
A+ +P + + T++ N+K S++ +S GK+ D
Sbjct: 593 AQMKKPSEAKFKATVKITEGNIKIVSKVERVDSYGKTAD 631
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,654,326
Number of Sequences: 27780
Number of extensions: 173968
Number of successful extensions: 592
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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