Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32386
         (353 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   3.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.3  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    21   4.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   5.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   5.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   5.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   7.5  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    20   7.5  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 164 QCSCLEIRRQRCE 126
           QCS L I R RC+
Sbjct: 60  QCSILRINRNRCQ 72


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 164 QCSCLEIRRQRCE 126
           QCS L I R RC+
Sbjct: 109 QCSILRINRNRCQ 121


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 82  RTNNRTPSNEPQNYLSH 132
           R N+R P   PQ  +SH
Sbjct: 118 RRNSRYPLRPPQEVISH 134


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 78  WFGRGRENSARLPACARTGVLRADSI 1
           W G GR++ +RL       ++  DS+
Sbjct: 485 WIGAGRDSDSRLLDLCTKFLMHKDSL 510


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +2

Query: 47  RAEFSRPRPNQHEQTIERLRTNLKTTSRIAACESLGKSI 163
           R E  R R     + +  L    KTT  ++ CE L  ++
Sbjct: 5   RREARRARTAFTYEQLVALENKFKTTRYLSVCERLNLAL 43


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 48  ARSSRDRDQTNTNKQSNAFERTSK 119
           ++S   RD++NT+  S  F  + K
Sbjct: 87  SKSPESRDRSNTSNTSKTFILSDK 110


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 87  CSCWFGRGRENSARLPACART 25
           C C      EN AR+ AC R+
Sbjct: 305 CGCNSTMLNENPARVMACMRS 325


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 87  CSCWFGRGRENSARLPACART 25
           C C      EN AR+ AC R+
Sbjct: 305 CGCNSTMLNENPARVMACMRS 325


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 353 LQRLPLSSSCKSQCKTWQNPPTN 285
           LQ  P+S S  +  +T   PP +
Sbjct: 348 LQEKPISDSTSTTTETVNTPPAS 370


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 242 PYIRQAASIED 210
           PYIRQA ++ D
Sbjct: 31  PYIRQAVAMRD 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,893
Number of Sequences: 438
Number of extensions: 2221
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)