Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32374
(614 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 120 2e-28
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 89 6e-19
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 36 0.004
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 32 0.057
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 30 0.31
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 29 0.71
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 28 0.93
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 0.93
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 1.6
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 3.8
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 3.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.0
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 25 6.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 6.6
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 8.7
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 120 bits (288), Expect = 2e-28
Identities = 57/98 (58%), Positives = 72/98 (73%)
Frame = +3
Query: 270 PSHIKVNLPALSPTMESGSIVSWEKKEGDKLXEGDLLCEIETDKATMGFETPEEGYLAKI 449
P+H +N+PALSPTM +G+I +++KK GDK+ GD+LCEIETDKA + FE +EGYLAKI
Sbjct: 51 PAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKI 110
Query: 450 LIPAGTKGVPVGKLLCIIVGDXNDVAAFKDFKDDSSPA 563
LI GTK VPVGK L + V + DVAA DF + S A
Sbjct: 111 LIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSA 148
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 88.6 bits (210), Expect = 6e-19
Identities = 51/128 (39%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Frame = +3
Query: 192 LLEHAQNQTVLSTP---QWTVQMRYY--SSLPSHIKV-NLPALSPTMESGSIVSWEKKEG 353
+L+H +Q V ++ +V+ RY+ S+L + +PALSPTME G+I W KEG
Sbjct: 1 MLKHYIHQCVKASSCKHSLSVKQRYFHCSALNGVASMFRMPALSPTMEEGNITKWHFKEG 60
Query: 354 DKLXEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDXNDVAAF 533
D GD+L E+ETDKATM E + G LAK+LI G+ +PVGK + I+ +++
Sbjct: 61 DSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGS-NIPVGKNIAIVADAEDNLKDL 119
Query: 534 KDFKDDSS 557
+ KD++S
Sbjct: 120 ELPKDEAS 127
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 282 KVNLPALSPTMESGSIVSWEKKEGDKLXEGDLLCEIETDKATMGFETPEEGYLAKILIPA 461
++ P ++ G++ W K+ G+ + + + + +ETDK P+ G L + L+
Sbjct: 44 RIKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKE 103
Query: 462 G 464
G
Sbjct: 104 G 104
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 32.3 bits (70), Expect = 0.057
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 318 SGSIVSWEKKEGDKLXEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 464
SG+IV KEG K+ +GD++ + K + P G L + + G
Sbjct: 1122 SGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQG 1170
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 29.9 bits (64), Expect = 0.31
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 195 LEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 359
L Q Q +++ P W YY +P H + L T+ S WE++ G++
Sbjct: 257 LRFTQRQILMNDPYWNRGF-YYDGVPPHTGMKLAREVATISYRSGPEWEQRFGNR 310
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 28.7 bits (61), Expect = 0.71
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 180 VTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKVNLPALSP-TMESGSIVS 335
V+NK L HAQ + S P Q + + S PS + +++P T+E+G++ S
Sbjct: 177 VSNKSLPHAQQSIIRSFPDIQKQPKGFFSYPSS---TVSSIAPSTLEAGNLHS 226
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 28.3 bits (60), Expect = 0.93
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 93 RNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLP 272
++ L D + IRS ++ LA +V + LE + + V T QW +M + +
Sbjct: 1060 KSPFLGDDEAREIRSKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTL 1119
Query: 273 SHIKVNLPALS 305
I+ N LS
Sbjct: 1120 QQIRQNRNELS 1130
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 0.93
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 210 NQTVLSTPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKE 350
N + +TP W V+ S+L + + + PAL P+ V KK+
Sbjct: 646 NSSAANTPSWGVRKARASALNARSEEDFPALPPSTSKRISVQLGKKQ 692
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +3
Query: 288 NLPALSPTMESGSIVSWEKKEGDKLXEGDLLCEIETDKATMGFETPEEGYLAKILIPAGT 467
N P T G +V + + G+ + G+ E+E K M E+G + I P +
Sbjct: 708 NDPTQLRTPSPGKLVRFLVETGEHIKAGEAYAEVEVMKMIMPLVATEDGVVQLIKQPGAS 767
Query: 468 KGVPVGKLLCIIVGD 512
+ G +L I+ D
Sbjct: 768 --LDAGDILGILTLD 780
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 403 QLWALRHLKKVTWPKY*FRPVQRECL 480
+LW L + K+VTW Y + R CL
Sbjct: 260 ELWCLLNDKRVTWKAYAGHWIARVCL 285
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 354 DKLXEGD--LLCEIETDKATMGFETPEEGYLAKILIPAGTKGV 476
D+L G L + + DK + +ETP EGY +L+ A K V
Sbjct: 798 DQLQPGKVALFVDWQIDKFSFFYETPAEGY--NLLVEANEKSV 838
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 5.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 120 KKAIRSNITRCISTELAKRKVTN 188
K A+R+NI RC+ T + + N
Sbjct: 3460 KSAVRTNIERCVQTSIESKYYKN 3482
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 65 IDNVANNCVTESNLKRWS*ESYTVEH 142
I+NVANN + L WS Y V+H
Sbjct: 157 INNVANNSLKVKPLTLWSTLLYIVQH 182
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 499 LLLEIXMMLRHSKISKMTHHLQHLK 573
L + + +L+HS I K+ H+LQ+ K
Sbjct: 4454 LNVSVSDILQHSSIEKLAHYLQYEK 4478
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 FDSVTQLFAT-LSIFFTKTIPS 40
F+S T + +T L +FFT+T PS
Sbjct: 820 FESTTLVLSTGLDVFFTRTAPS 841
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,536,419
Number of Sequences: 5004
Number of extensions: 52673
Number of successful extensions: 141
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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