Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32367
(408 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical pr... 31 0.24
U46674-3|AAA85755.1| 301|Caenorhabditis elegans Hypothetical pr... 30 0.56
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 30 0.74
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 30 0.74
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 0.74
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 29 1.7
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 28 2.3
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 28 2.3
U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical pr... 28 2.3
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 3.0
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 3.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 3.0
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 27 3.9
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 27 3.9
U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical pr... 27 3.9
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 3.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 5.2
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z50006-6|CAA90298.1| 334|Caenorhabditis elegans Hypothetical pr... 27 6.9
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z78018-8|CAB01450.2| 405|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z78014-3|CAB01430.2| 405|Caenorhabditis elegans Hypothetical pr... 26 9.1
>U64605-3|AAF98605.3| 423|Caenorhabditis elegans Hypothetical
protein C05D9.3 protein.
Length = 423
Score = 31.5 bits (68), Expect = 0.24
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 110 LAGSVITSKLDCICDEH----TTRT*QSGLWQPCECGSVSCDQWCGGKQCEC 253
+AG +T+ C C++H + Q+G CG CDQ GG +CEC
Sbjct: 206 IAGLYVTTICGCECEKHPEINSRLCHQNG---HLVCGQCVCDQSRGGDKCEC 254
>U46674-3|AAA85755.1| 301|Caenorhabditis elegans Hypothetical
protein T26A8.2 protein.
Length = 301
Score = 30.3 bits (65), Expect = 0.56
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 320 IAYISRLHRLSRNIRSTTFTCIHIHIAYHRTTDRMRHYRTHRAAKALT 177
IA I + RLS + + FT HI I R D + HY+ H K +T
Sbjct: 169 IAQIQTIARLSMDQSNPFFTKEHIRIIDRRRQD-VEHYQIHSVLKRIT 215
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.9 bits (64), Expect = 0.74
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Frame = +3
Query: 39 YGGVVPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHDSQGFGSPVSAVVSH 218
YG P S S+ + T S V PV+S+ + ++T P S GS V+ VVS
Sbjct: 188 YGSSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSST-PIASSSSSGSTVT-VVSG 245
Query: 219 AISGAXXXXXXXXACESGAPDV------SAEAMQPGDIGDGKEETQNAPPT 353
+ S + +G S + PG TQ+A P+
Sbjct: 246 SSSTYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPS 296
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.9 bits (64), Expect = 0.74
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Frame = +3
Query: 39 YGGVVPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHDSQGFGSPVSAVVSH 218
YG P S S+ + T S V PV+S+ + ++T P S GS V+ VVS
Sbjct: 395 YGSSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSST-PIASSSSSGSTVT-VVSG 452
Query: 219 AISGAXXXXXXXXACESGAPDV------SAEAMQPGDIGDGKEETQNAPPT 353
+ S + +G S + PG TQ+A P+
Sbjct: 453 SSSTYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPS 503
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 0.74
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Frame = +3
Query: 39 YGGVVPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHDSQGFGSPVSAVVSH 218
YG P S S+ + T S V PV+S+ + ++T P S GS V+ VVS
Sbjct: 395 YGSSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSST-PIASSSSSGSTVT-VVSG 452
Query: 219 AISGAXXXXXXXXACESGAPDV------SAEAMQPGDIGDGKEETQNAPPT 353
+ S + +G S + PG TQ+A P+
Sbjct: 453 SSSTYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPS 503
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 42 GGVVPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHDSQGFG 191
G + S N+ TV TN+ + VNS + T P D G G
Sbjct: 261 GATTTIPSNGNITSTTTTVPSTNTTTTA--VNSNSTTTTVSPDDDYNGSG 308
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +2
Query: 149 CDEHTTRT*QSGLWQPCECGSVSCDQWCGGKQCE 250
C T+ G +P +C C GG++CE
Sbjct: 325 CKSEKTKCENGGYMRPSKCSECLCPDGLGGEKCE 358
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 28.3 bits (60), Expect = 2.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 191 QPCECGSVSCDQWCG 235
QPC+CG +C W G
Sbjct: 222 QPCQCGEAACRGWIG 236
>U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical
protein D2021.2a protein.
Length = 322
Score = 28.3 bits (60), Expect = 2.3
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Frame = -2
Query: 374 PVDTFILCRWCILGFLFT---IAYISRLHRLSRNIRSTTFTCIHIHIAYHRTTDRMRHYR 204
P+ T+ + GF T Y+ + + S F + I YH T ++ Y
Sbjct: 23 PISTYFFFLVPMFGFFMTYLLFKYLPLIIATFSTLISCIFLMVLIRFDYHDPTYKLLPYG 82
Query: 203 THRAAKALTVMSWLCVRH 150
A L V+SW H
Sbjct: 83 VTIAEAILMVLSWSAYAH 100
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 191 QPCECGSVSCDQWCGGK 241
Q C CGS SC W G K
Sbjct: 800 QQCFCGSASCSGWIGQK 816
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 191 QPCECGSVSCDQWCGGK 241
Q C CGS SC W G K
Sbjct: 814 QQCFCGSASCSGWIGQK 830
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/68 (22%), Positives = 26/68 (38%)
Frame = +2
Query: 50 CASHVSKQCSSCRGNCIRNQLAGSVITSKLDCICDEHTTRT*QSGLWQPCECGSVSCDQW 229
C + QC C+ C +A +IT ++ C + Q C+ +C Q+
Sbjct: 249 CQQPSAPQCQQCQSACQSPVVAPQIITLEVVPQCQQQCAPQCQQPAAPQCQQCQTTCQQF 308
Query: 230 CGGKQCEC 253
Q +C
Sbjct: 309 APVCQQQC 316
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/68 (22%), Positives = 26/68 (38%)
Frame = +2
Query: 50 CASHVSKQCSSCRGNCIRNQLAGSVITSKLDCICDEHTTRT*QSGLWQPCECGSVSCDQW 229
C + QC C+ C +A +IT ++ C + Q C+ +C Q+
Sbjct: 350 CQQPAAPQCQQCQSACQSPVIAPQIITLEVVPECQQQCAPQCQQPSAPQCQQCQNTCQQF 409
Query: 230 CGGKQCEC 253
Q +C
Sbjct: 410 APVCQQQC 417
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -3
Query: 403 PPLPTSANANPLILSSSVGGAFWV--SSLPSPISPGCIASAETSGAPLS 263
PP P P + +G V SSLP+P+ ASA + P++
Sbjct: 419 PPQPPPTTPQPAFVPRQIGRIEIVMPSSLPAPVVSAAAASASAAAHPVA 467
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 3 NVVPSQTSMGLGYGGVVPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHDSQ 182
++ PS +S+ V+P SQ+ +AP G +P LP++S V+ +Q
Sbjct: 74 DIAPSLSSISPPSSSVLPTDSQTYLAPDSIRSIGERTP---LPLSSPTGVSPSQYKTLPA 130
Query: 183 GFGS 194
GFG+
Sbjct: 131 GFGA 134
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/68 (25%), Positives = 21/68 (30%)
Frame = +2
Query: 47 CCASHVSKQCSSCRGNCIRNQLAGSVITSKLDCICDEHTTRT*QSGLWQPCECGSVSCDQ 226
C V + C SC R G + C C H+ E GS C+
Sbjct: 689 CLPGFVGQFCESCESGFRRETKFGGPFNHCIKCDCHNHSNSC-------EAESGSCICEH 741
Query: 227 WCGGKQCE 250
G CE
Sbjct: 742 NTAGDTCE 749
>U40959-2|AAA81766.1| 413|Caenorhabditis elegans Hypothetical
protein B0310.2 protein.
Length = 413
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 263 TCIHIHIAYHRTTDRMRHYRTHRAAKA 183
TC H H ++R + +RH +TH A
Sbjct: 337 TCPHCHKKFNRKDNLLRHKKTHSPTSA 363
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 137 LDCICDEHTTRT*QSGLWQPCECGSVSCDQWCGGKQCEC 253
+D C E + + SG + +C SV D +C QC C
Sbjct: 144 VDAYCYEKISPS-DSGCFYDTQCASVWPDSYCKNGQCMC 181
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +3
Query: 129 PVNSTAYVTNTQPGHDSQGFGSPVSAVVSHAISGAXXXXXXXXACESGAPDVSAEAMQPG 308
P NS QPG+D+ G+G V A GA + G P + PG
Sbjct: 197 PGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHPGSSGGGRPGPAGPKGAPG 256
Query: 309 DIG 317
G
Sbjct: 257 QPG 259
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 27.1 bits (57), Expect = 5.2
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Frame = +2
Query: 41 RRCCASHVSKQCSSCRGNC--IRNQLAGSVITSK----LDCICDE--HTTRT*QSGLWQP 196
RR C S + +QC + +GNC RN + + C CD+ H + + +
Sbjct: 394 RRDCMSGIDEQCDNPQGNCSSTRNSCDQTWNCQRHAGFESCSCDDGYHLSPYDKKTCLRS 453
Query: 197 CECGSVSCDQWC-----GGKQCEC 253
C +C +C G QC C
Sbjct: 454 PSCPKANCSHFCIDRRDVGHQCFC 477
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 51 VPVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNTQPGHD-SQGFGSPVS 203
VP+ +++N++P + +S +L V +T V N+Q + SQ SP+S
Sbjct: 660 VPMETEANISPTNQLNTQESSESNALSVEATQPVLNSQNTPEASQSPASPIS 711
>Z50006-6|CAA90298.1| 334|Caenorhabditis elegans Hypothetical
protein T07C5.5 protein.
Length = 334
Score = 26.6 bits (56), Expect = 6.9
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 380 RQPVDTFILCRWCILGFLFTIAYISRLHRLS-RNIRSTTFTCIHIHIAYHRTTDRMRHYR 204
R+P F C W ++ L I++I +L + + + T + H+ Y MR Y
Sbjct: 127 RKPGTVFNFCDWGVINHLSCISFIRQLDFIKFLSSQDTIAIFKYSHLMYLILVTAMRSYL 186
Query: 203 THRAA 189
AA
Sbjct: 187 CKEAA 191
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 191 QPCECGSVSCDQWCGGKQCECE 256
+P +CG C + C G++CE E
Sbjct: 699 KPLKCGVHVCQRTCHGEECEKE 720
>Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical
protein C27A7.9 protein.
Length = 95
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 74 CSSCRGNCIRNQLAGSVITSKLDCICDEHTT 166
CS GNC A S + CIC +TT
Sbjct: 33 CSDSCGNCGNQTRARSCSSQTASCICTGNTT 63
>Z78018-8|CAB01450.2| 405|Caenorhabditis elegans Hypothetical
protein W07G4.6 protein.
Length = 405
Score = 26.2 bits (55), Expect = 9.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 374 PVDTFILCRWCILGFLFTIAYISRLHRLSRNIRSTTFTCIHIHIAYHRTTDRMRH-YRT- 201
P +L W I+ T+A +S ++ NI+ T +H + D+M H YR
Sbjct: 298 PAIYVLLNGWTIVCMGITVAGLSPPAKVQSNIQETAEILMHDDVLQTCGDDQMHHTYRVT 357
Query: 200 -HRAAKALTVMSWLCVRHICSRVY 132
R + + M++L H+ S +
Sbjct: 358 LDRCLHSNSKMAFLNAFHVDSNCF 381
>Z78014-3|CAB01430.2| 405|Caenorhabditis elegans Hypothetical
protein W07G4.6 protein.
Length = 405
Score = 26.2 bits (55), Expect = 9.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = -2
Query: 374 PVDTFILCRWCILGFLFTIAYISRLHRLSRNIRSTTFTCIHIHIAYHRTTDRMRH-YRT- 201
P +L W I+ T+A +S ++ NI+ T +H + D+M H YR
Sbjct: 298 PAIYVLLNGWTIVCMGITVAGLSPPAKVQSNIQETAEILMHDDVLQTCGDDQMHHTYRVT 357
Query: 200 -HRAAKALTVMSWLCVRHICSRVY 132
R + + M++L H+ S +
Sbjct: 358 LDRCLHSNSKMAFLNAFHVDSNCF 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,178,627
Number of Sequences: 27780
Number of extensions: 218991
Number of successful extensions: 992
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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