Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32367
         (408 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.33 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.44 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   2.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   2.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   2.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.4  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 392 DERQRQPVDTFILCRWCILGFLFTI 318
           D ++ QP +TF L    ++GFLF I
Sbjct: 10  DGKEDQPENTFSLLSVLLVGFLFLI 34


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 93  TVSGTNSPVVSLPVNSTA 146
           ++SGT  P+ SLP +ST+
Sbjct: 848 SMSGTTVPITSLPASSTS 865


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 54  PVMSQSNVAPVEATVSGTNSPVVSLPVNSTAYVTNT 161
           PV+S S      + ++ T S +V   +NST  VTN+
Sbjct: 321 PVLSSSTTTT--SPMTSTKSTIVRNHLNSTCSVTNS 354


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
          protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 42 GGVVPVMSQSNVAPVE 89
          GGV   +S++ VAP+E
Sbjct: 17 GGVAAAISKTTVAPIE 32


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
          protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 42 GGVVPVMSQSNVAPVE 89
          GGV   +S++ VAP+E
Sbjct: 17 GGVAAAISKTTVAPIE 32


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 389 ERQRQPVDTFILCRWCILGFLFTIAYISRLHRLSRNIRSTTFTCIHIHI 243
           E+ + P + F  C+W   GFL          R   +I  T F  I+IH+
Sbjct: 143 EKAKFPQEFFPECKWSRKGFL----------RTRWSISGTVFDLINIHL 181


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 215 RHYRTHRAAK 186
           RHYRTH   K
Sbjct: 109 RHYRTHTGEK 118


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 59  DWHNTSVTQTHACL 18
           DW   +  ++HACL
Sbjct: 123 DWKYYTTNESHACL 136


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 99   SGTNSPVVSLPVNSTAY 149
            SGT  P V  P N++A+
Sbjct: 1756 SGTMGPPVGHPTNASAH 1772


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,288
Number of Sequences: 438
Number of extensions: 2538
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)