Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32363
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   4.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 440 ESNIHRYRSEVAVLFF 487
           ESN H+Y++ + V+++
Sbjct: 62  ESNSHQYKNPIIVMYY 77


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 352 RMTSLSNVYDQQNTKYS 302
           R+TS + VYD + TKY+
Sbjct: 222 RLTSSTFVYDPRYTKYT 238



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 337 SNVYDQQNTKY 305
           SN+Y++QN +Y
Sbjct: 362 SNIYERQNNEY 372


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 349 MTSLSNVYDQQNTKYSYS 296
           ++SLSN Y+  N  Y Y+
Sbjct: 315 ISSLSNNYNYNNNNYKYN 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,733
Number of Sequences: 438
Number of extensions: 3329
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)