Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32359
(537 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0240 + 15958110-15958305,15959586-15960763 37 0.009
08_02_0996 - 23404595-23405596 32 0.33
08_02_0997 + 23409932-23410894 31 0.44
09_04_0421 + 17417851-17418840 31 0.58
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 31 0.77
09_04_0412 + 17369935-17370873 30 1.3
09_04_0411 + 17366559-17367497 30 1.3
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 30 1.3
01_01_0379 - 2956396-2957409 30 1.3
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 29 1.8
07_01_0447 - 3377666-3378673 29 1.8
03_06_0249 + 32638112-32639140 29 1.8
02_05_0955 - 33056171-33057256 29 1.8
01_01_0378 - 2953514-2954341,2954388-2954504 29 1.8
07_03_1465 - 26729872-26730909 29 2.3
07_01_0448 - 3383706-3384761 29 2.3
07_01_0446 - 3371829-3372132,3374691-3375673 29 2.3
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 3.1
01_01_0370 + 2895685-2895717,2895892-2896944 29 3.1
09_04_0417 + 17404433-17405392 28 4.1
07_03_1467 - 26736859-26736868,26737769-26738439 28 4.1
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 4.1
04_04_0052 + 22386553-22387506 28 4.1
12_02_0885 + 23994354-23994584,23994987-23995342,23995549-239956... 28 5.4
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 28 5.4
04_04_1166 - 31427523-31428154,31428888-31429020 28 5.4
03_02_0423 + 8321076-8322164 28 5.4
12_02_0105 + 13647356-13648534 27 7.2
12_01_0203 + 1520079-1520302,1522346-1522405,1522794-1523016,152... 27 7.2
07_01_0449 - 3392512-3393504 27 7.2
07_01_0445 - 3365244-3366227 27 7.2
07_01_0233 - 1703602-1705623 27 7.2
02_05_1249 - 35240823-35242184 27 7.2
02_04_0288 + 21607289-21608251 27 7.2
01_05_0810 - 25435193-25435323,25435434-25436360,25436459-254369... 27 7.2
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 27 9.5
07_03_1206 + 24878301-24879308 27 9.5
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921... 27 9.5
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 27 9.5
01_02_0127 + 11377064-11377801 27 9.5
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 37.1 bits (82), Expect = 0.009
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 277 PPLGSLRFKAPQSPE-PWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTP---- 441
P S RF AP+ W RD T GN A D V + DE + + V+ P
Sbjct: 52 PKAHSDRFGAPERVGGSWCATRDKTRSGNGVATKDVV-----IDDETGVSVRVFLPVDAA 106
Query: 442 ---STDGAFLPVMIWIHGGGFKWGSGNTNL 522
+ G LP+++++HGG F GS + +
Sbjct: 107 AAAAAAGRRLPLVVYVHGGAFCTGSASARM 136
>08_02_0996 - 23404595-23405596
Length = 333
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 382 VFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGF 495
V +K V D + L + +Y P G LPV+I+ HGG F
Sbjct: 71 VVSKDVVVDRSTGLAVRLYRPKHRGGRLPVLIYFHGGAF 109
>08_02_0997 + 23409932-23410894
Length = 320
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 LFLNVYTPSTDGA---FLPVMIWIHGGGFKWGS 507
L+ +Y P DG LPV++++HGGG GS
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGS 88
>09_04_0421 + 17417851-17418840
Length = 329
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)
Frame = +1
Query: 430 VYTPSTD----GAFLPVMIWIHGGGFKWGS 507
+Y PST G LPV+++ HGGGF GS
Sbjct: 65 IYLPSTPASGYGRRLPVLVFFHGGGFCLGS 94
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +2
Query: 209 RDGS*TARPGRPSTVSKEYHMRNPHWVLCDLRPHNLQNPGTASGMPRRKGTCVLKSIQSS 388
RDG A PG S S E +N NL + G P +K + ++
Sbjct: 26 RDGGVAASPGSQSAASTERRKKNRG------SKRNLSDGSGEDGRPGKKINLEEEELEEE 79
Query: 389 RNPMSAMKTACS*TCTPL 442
R P+ +ACS +PL
Sbjct: 80 RMPLEDEASACSSCSSPL 97
>09_04_0412 + 17369935-17370873
Length = 312
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 382 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 495
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQELGKKLPVLVYFHGGGF 84
>09_04_0411 + 17366559-17367497
Length = 312
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +1
Query: 382 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 495
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQETGKKLPVLVYFHGGGF 84
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Frame = +1
Query: 46 IKHLCNELNK---ILINNSGVNNEF---PTMISAVNEFL---DDLRGGRMSESPLVTVEQ 198
+K LC EL I++ G+N P + V F+ D L+G RM +SP+ ++
Sbjct: 114 LKELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDE 173
Query: 199 GQLQGRIVNSPSG 237
G SP G
Sbjct: 174 AIHHGHTSQSPVG 186
>01_01_0379 - 2956396-2957409
Length = 337
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 418 LFLNVYTPST--DGAFLPVMIWIHGGGFKWGS 507
L L VY P T D LPV++ HGGG+ G+
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLGT 95
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 259 GIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGN-VCAQIDPVFAKSY 399
G+P A + SL PQ+ E W+ RD+ E + + ++ + + SY
Sbjct: 382 GLPLAIITMASLLVNKPQTKEQWEKYRDSIVENDPIVNRMQKILSLSY 429
>07_01_0447 - 3377666-3378673
Length = 335
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 379 PVFAKSYVGDENC-LFLNVYTPSTDGAF---LPVMIWIHGGGF 495
PV K V D L L +Y P+ G LPV+++ HGGGF
Sbjct: 49 PVQWKDVVYDAGRGLRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>03_06_0249 + 32638112-32639140
Length = 342
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 LFLNVYTP---STDGAFLPVMIWIHGGGFKWGS 507
L L VY P + G LPV+++ HGGG+ GS
Sbjct: 60 LKLRVYRPPAATVAGEKLPVLVYFHGGGYFIGS 92
>02_05_0955 - 33056171-33057256
Length = 361
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 448 DGAFLPVMIWIHGGGFKWGSGNTNL 522
DG LP+++++HGG F GS + +
Sbjct: 86 DGRRLPLVVYVHGGAFCTGSASARM 110
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Frame = +1
Query: 304 APQSPEPWDGIRDATAEGNVCAQIDPVFAKSY---VGDE-NCLFLNVYTPST-------- 447
AP E + G+ ++G+V + V S+ V D + L + VYT T
Sbjct: 9 APHVVEDFYGVVKLLSDGSVVRGDESVLIPSWKDVVYDATHGLRVRVYTSRTAAAAAAGD 68
Query: 448 DGAFLPVMIWIHGGGFKWGS 507
DG LPV+++ HGGG+ G+
Sbjct: 69 DGGKLPVLVYFHGGGYCIGA 88
>07_03_1465 - 26729872-26730909
Length = 345
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 418 LFLNVYTPSTDGAF--LPVMIWIHGGGF 495
L+ V+ P T+ A LPV+++ HGGGF
Sbjct: 74 LWARVFCPPTNTAAVKLPVVVYFHGGGF 101
>07_01_0448 - 3383706-3384761
Length = 351
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 451 GAFLPVMIWIHGGGFKWGS 507
G LPV+++ HGGGF GS
Sbjct: 88 GGKLPVLVYFHGGGFCLGS 106
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 LFLNVYTPSTDGAF---LPVMIWIHGGGFKWGS 507
L + +Y P+ G LPV+++ HGGGF GS
Sbjct: 64 LGVRMYRPAATGGAEEKLPVVVYFHGGGFCIGS 96
>11_06_0388 + 23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 414 VFIADIGFREDW-IDLSTHVPFRRGIPDAVPGFWRLWGLKSQRTQ 283
V + + F+E+ + + R P+A PG WR+W +RT+
Sbjct: 1052 VILGMVSFQEEQSFEPQGMIKVERVEPNAAPGGWRIWPFSFKRTR 1096
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 448 DGAFLPVMIWIHGGGFKWGS 507
DG LPV+++ HGGG+ G+
Sbjct: 98 DGGKLPVLVYFHGGGYCIGA 117
>09_04_0417 + 17404433-17405392
Length = 319
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +1
Query: 298 FKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIW 477
F +P +DG T++ V V A+ Y+ D L P LP++++
Sbjct: 27 FGTETTPAGFDGATGVTSKDVVIDDATGVSARLYIPD-----LPASGPGHHRKKLPIVVY 81
Query: 478 IHGGG 492
HGGG
Sbjct: 82 FHGGG 86
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +1
Query: 418 LFLNVYTPSTDGAF----LPVMIWIHGGGF 495
L+ V++P++ A LPV+++ HGGGF
Sbjct: 83 LWARVFSPASSSAVESPPLPVVVYFHGGGF 112
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 304 APQSPEPWDGIRDATAEGNVCAQIDPVFAK 393
AP+ P P+DG D + G + ID VF K
Sbjct: 565 APEPPYPFDGETDMSVGGGLAELIDWVFDK 594
>04_04_0052 + 22386553-22387506
Length = 317
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 451 GAFLPVMIWIHGGGFKWGS 507
G LPV+++ HGGGF GS
Sbjct: 73 GERLPVVVYFHGGGFVIGS 91
>12_02_0885 +
23994354-23994584,23994987-23995342,23995549-23995663,
23995918-23995962,23996151-23996333,23996802-23996978,
23997345-23997476,23997587-23997766,23999116-23999247,
24000212-24000280,24000377-24000490,24000579-24000806,
24001343-24001486
Length = 701
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = +1
Query: 25 YHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLRGGRMSESPLVTVEQGQ 204
++ C K CN+L +L++ + + A + F D+L ++E +V+ ++
Sbjct: 521 FNSCFCSCKMCCNDLQLVLLDEEPDHQYGSRRMPARSRFGDELEAEALAERRIVSAKKSS 580
Query: 205 LQGRIVNSPS 234
+ I PS
Sbjct: 581 MGRNIPRKPS 590
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 460 LPVMIWIHGGGFKWGS 507
LPV+++ HGGGF GS
Sbjct: 563 LPVVVYFHGGGFVTGS 578
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -2
Query: 395 DFAKTGSI*AHTFPSAVASLMPSQGSGDCGALNRKEPNGG 276
DFA G HT P A L QG+ G + +P GG
Sbjct: 105 DFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGG 144
>03_02_0423 + 8321076-8322164
Length = 362
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 382 VFAKSYVGDENC-LFLNVYTPSTDGAF--LPVMIWIHGGGFKWGS 507
V A+ V D ++ +Y P+ A +PV+++ HGGGF GS
Sbjct: 73 VIARDAVVDRATRVWARLYAPAAAAAAGRVPVVVYFHGGGFCVGS 117
>12_02_0105 + 13647356-13648534
Length = 392
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 235 GKAFYSFQGIPYAKPPLGSLRFKAPQ---SPEPWDGIRDATAEGNVCAQI 375
G AF + IP P+GSL +KAP+ +D D A G + AQ+
Sbjct: 210 GMAFAMEESIPPYSNPVGSLPYKAPELLLRSSIYDETIDMWALGCIMAQL 259
>12_01_0203 +
1520079-1520302,1522346-1522405,1522794-1523016,
1523038-1523434,1523522-1523781,1523866-1524011,
1524044-1524317,1524501-1525547
Length = 876
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 173 SDILPPRRSSRNSFTADIIVGNSLFTPELLIKILFNSLHRCFIHSLHS 30
+D++ P R F D +V S F P + SLH+CF H S
Sbjct: 407 ADVMRPDDVGRQLF--DELVERSFFQPTFVSNNNSVSLHQCFFHGERS 452
>07_01_0449 - 3392512-3393504
Length = 330
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 418 LFLNVYTP-STDGAFLPVMIWIHGGGFKWGS 507
L + +Y P G LPV + HGGGF GS
Sbjct: 54 LGVRLYRPRERGGGRLPVFFYYHGGGFCIGS 84
>07_01_0445 - 3365244-3366227
Length = 327
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 442 STDGAFLPVMIWIHGGGFKWGSG 510
+ + A +PV+ + HGGGF GSG
Sbjct: 70 AANDARVPVVAYFHGGGFCIGSG 92
>07_01_0233 - 1703602-1705623
Length = 673
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 328 DGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNV 432
D + D EG++ +DP Y DE CL L +
Sbjct: 574 DWVMDCWNEGSLLETMDPKLQNEYDADEACLALKL 608
>02_05_1249 - 35240823-35242184
Length = 453
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -2
Query: 332 PSQGSGDCGALNRKE-PNGGFAYGIPWKL*KAFPDGLFT--IRPWSCPCSTVTRGDSDIL 162
P +GS + A+ P G A G+ A D F ++ W+ C + GD D +
Sbjct: 137 PEEGSSELAAVQVTVFPGKGLAVGVSIHH-VACDDSSFMHFVKTWAANCRVASGGDVDAV 195
Query: 161 PP 156
PP
Sbjct: 196 PP 197
>02_04_0288 + 21607289-21608251
Length = 320
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 439 PSTDGAFLPVMIWIHGGGF 495
P+ LPV++++HGGGF
Sbjct: 67 PAAAAERLPVVVYVHGGGF 85
>01_05_0810 -
25435193-25435323,25435434-25436360,25436459-25436987,
25437089-25437190
Length = 562
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 327 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 199
PG W L T WG ++ + +E G P +V P +LP
Sbjct: 519 PGVWFLHCHLEVHTSWGLKMAFLVEDGSG-PDESVLPPPKDLP 560
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 350 AVASLMPSQGSGDCGALNRKEPNGGFAYGIPWKL 249
A+ +L + G CGA N G GIPW L
Sbjct: 117 ALVALGCMEHRGGCGADNDSGDGSGLMSGIPWDL 150
>07_03_1206 + 24878301-24879308
Length = 335
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 451 GAFLPVMIWIHGGGFKWGS 507
G LPV+++ HGGGF + S
Sbjct: 88 GDHLPVVVYFHGGGFVFHS 106
>06_01_1118 -
9213785-9215051,9215811-9215992,9216075-9216611,
9216742-9217224
Length = 822
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 268 YAKPPLGSLRFK-APQSPE--PWDGIRDATA-EGNVCAQIDPVFAKSYVGDENCLFLNVY 435
Y KP LG ++++ P S + D R ++ G A I A++++ CL V
Sbjct: 104 YGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLTRVA 163
Query: 436 TPSTDGAFLPVMIWIHGGGFKW 501
P+T ++ +GGG+ +
Sbjct: 164 EPTTSWPSSEHTVYHYGGGYNF 185
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 232 SGKAFYSFQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEG 357
S K +G+P A +GSL PQ+ WD + + G
Sbjct: 357 SEKTLRKCEGVPLAIITIGSLLAMRPQNLYQWDRVHNLIGSG 398
>01_02_0127 + 11377064-11377801
Length = 245
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +1
Query: 439 PSTDGAFLPVMIWIHGG----GFKWGSGNTNLXG 528
P GAFL M+ H G G WGSGN G
Sbjct: 211 PDQAGAFLAAMLRFHLGVHRAGRNWGSGNGGRRG 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,967,656
Number of Sequences: 37544
Number of extensions: 463305
Number of successful extensions: 1354
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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