Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32352
(621 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 134 7e-33
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 116 2e-27
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 89 6e-19
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 85 6e-18
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 83 4e-17
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 68 1e-12
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 41 2e-04
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 26 3.8
SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 26 3.8
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 26 3.8
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 25 8.8
SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 8.8
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 25 8.8
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 134 bits (325), Expect = 7e-33
Identities = 61/112 (54%), Positives = 80/112 (71%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
T+ ++V +DM + KEEIFGPV ++IKF T+EE I R NN+ YGLAAG+ T N NA++ S
Sbjct: 386 TILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVS 445
Query: 440 KHVEAGTVWVNNYLTMAHQAPFGGFKDSGIGRENGIKAVEAYLEEKTVIISL 285
+EAGTVWVN Y + HQ PFGG+K+SGIGRE G + Y + K V I+L
Sbjct: 446 NALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKAVHINL 497
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 116 bits (280), Expect = 2e-27
Identities = 59/116 (50%), Positives = 76/116 (65%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
T+FAD +++MTI KEEIFGPV +I KF T +E I++ANNT YGLAA FT + A + S
Sbjct: 381 TIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVS 440
Query: 440 KHVEAGTVWVNNYLTMAHQAPFGGFKDSGIGRENGIKAVEAYLEEKTVIISLXKKL 273
+EAG V++N+ QAPFGG K SGIG E G +E Y + K V I+ KL
Sbjct: 441 DELEAGMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHINFNNKL 496
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 88.6 bits (210), Expect = 6e-19
Identities = 43/108 (39%), Positives = 62/108 (57%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
TV + V DM +A EE FGP+ S+ KFD EEVI+ AN+++ GLA +FT N + + +
Sbjct: 381 TVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSDVGLAGYVFTNNLSTMIHVA 440
Query: 440 KHVEAGTVWVNNYLTMAHQAPFGGFKDSGIGRENGIKAVEAYLEEKTV 297
K +E G V N + FGG K SG G+E G V+ ++ K +
Sbjct: 441 KELEVGLVGANIEMVDEPFISFGGIKQSGFGKEAGRLGVQEFMVVKEI 488
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 85.4 bits (202), Expect = 6e-18
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
TVF +V I +EEIFGPV ++ F T EE ++ AN++ YGL +G+F+TN FS
Sbjct: 388 TVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALELANDSEYGLGSGVFSTNPKTLEFFS 447
Query: 440 KHVEAGTVWVNNYLTMAHQAPFGGFKDSGIG 348
++EAG +NNY + H+ P+ G+K SG+G
Sbjct: 448 NNIEAGMCSLNNYHVVTHELPWIGWKHSGLG 478
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 82.6 bits (195), Expect = 4e-17
Identities = 41/111 (36%), Positives = 64/111 (57%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
TV + M I++EE FGPV ++ KFDT +EV+ AN++ GLA +F+ + + +
Sbjct: 386 TVIINAKQGMLISEEETFGPVGALFKFDTEDEVVAWANDSPVGLAGYLFSKDISRVFRVG 445
Query: 440 KHVEAGTVWVNNYLTMAHQAPFGGFKDSGIGRENGIKAVEAYLEEKTVIIS 288
+ ++ G V N L +PFGG K+SG GRE + YL+ K++ IS
Sbjct: 446 EALQVGMVGCNTGLVSDVLSPFGGVKESGFGREGSKYGISEYLDIKSLTIS 496
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 68.1 bits (159), Expect = 1e-12
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKFDTLEEVIDRANNTNYGLAAGIFTTNFNNALQFS 441
T+ D ++M IA+EE F P+ + + + E ++ AN T +GL A +F + F+
Sbjct: 359 TLLVDATNEMKIAQEECFAPIALVFRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFT 418
Query: 440 KHVEAGTVWVNNY-LTMAHQAPFGGFKDSGIGRENGIKAVEAYLEEKTV 297
++E G V VN++ Q PFGG K SG GR G + + K +
Sbjct: 419 DNLETGMVAVNDFGAFYLLQMPFGGCKKSGYGRFAGYEGLRGICNSKAI 467
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 40.7 bits (91), Expect = 2e-04
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Frame = -2
Query: 620 TVFADVNDDMTIAKEEIFGPVQSIIKF--DTLEEVIDRANNTN-YGLAAGIFTTNFNNAL 450
TV N I E+FGPV S+ + D L+ V D + T YGL IF +
Sbjct: 417 TVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLIDTTTPYGLTGSIFAQDRVVVR 476
Query: 449 QFSKHVE--AGTVWVNNYLT--MAHQAPFGGFKDSGIGRENG 336
+ + + AG ++N+ T + + PFGG + SG + G
Sbjct: 477 KLTDRLRNAAGNFYINDKCTGAVVGEQPFGGARASGTNDKAG 518
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 366 ESSERCLMC-HCQVVIHPNCSGLDMLTKLQCVVKVC 470
E+S + C +C +H NC G+ + + Q K C
Sbjct: 206 ENSNAIVFCDNCNTSVHQNCYGIPFVPEGQWFCKKC 241
>SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 456 VVKVCSEDSSCKTVICI 506
++K SED +CKT+ CI
Sbjct: 21 IIKRLSEDDNCKTIHCI 37
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 325 TALIPFSRPIPESLNPPK-GA*CAIVK 402
T L FSRPIP+ +NP + CA K
Sbjct: 423 TELRSFSRPIPDGINPSQVPVFCAFTK 449
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 25.0 bits (52), Expect = 8.8
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 528 LQCIELYNALDWTENLFL 581
L C+ ++ A+DW +F+
Sbjct: 80 LACVRVFQAIDWNSKIFI 97
>SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 47 KIETLFYTHTTIRYFLHCNIKRQKLSRAKGKLHWNR 154
K++ ++Y H + YF K+Q + R + NR
Sbjct: 226 KVQLMYYVHLFLNYFPSLGEKQQSIFRDISPTYSNR 261
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 377 FGGFKDSGIGRENGIKAV 324
+ GF D+ IGR+NG+KA+
Sbjct: 128 YSGFYDA-IGRDNGLKAI 144
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,469,856
Number of Sequences: 5004
Number of extensions: 49731
Number of successful extensions: 143
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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