Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32349
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0194 + 26287854-26288233,26289810-26290044                      164   3e-41
01_06_0525 - 30014497-30014731,30015509-30015573                      114   4e-26
01_06_0526 - 30016524-30016973                                         56   1e-08
03_04_0096 + 17270261-17270424,17270573-17270669                       51   6e-07
07_01_0122 - 926971-927378                                             48   6e-06

>05_06_0194 + 26287854-26288233,26289810-26290044
          Length = 204

 Score =  164 bits (399), Expect = 3e-41
 Identities = 78/105 (74%), Positives = 82/105 (78%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GV+FR SPRQ D MIVAGTLTNKMAPALRKVYDQMP+PRWVISMGSCAN           
Sbjct: 98  GVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSV 157

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWY 197
             GCDRIVPVDIYVPGCPP AEALLYGVLQLQKKI R +    W+
Sbjct: 158 VRGCDRIVPVDIYVPGCPPTAEALLYGVLQLQKKINRRRDFLHWW 202


>01_06_0525 - 30014497-30014731,30015509-30015573
          Length = 99

 Score =  114 bits (274), Expect = 4e-26
 Identities = 54/78 (69%), Positives = 57/78 (73%)
 Frame = -1

Query: 430 LRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXGCDRIVPVDIYVPGCPPXAEALLYG 251
           L +VYDQMP+PRWVISMGSCAN             GCDRIVPVDIYVPGCPP AEALLYG
Sbjct: 20  LVEVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG 79

Query: 250 VLQLQKKIKRMKTIQVWY 197
           VLQLQKKI R K    W+
Sbjct: 80  VLQLQKKINRRKDFLHWW 97


>01_06_0526 - 30016524-30016973
          Length = 149

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRK 422
           GV+FR SPRQ D MIVAGTLTNKMAPALRK
Sbjct: 93  GVIFRPSPRQSDCMIVAGTLTNKMAPALRK 122


>03_04_0096 + 17270261-17270424,17270573-17270669
          Length = 86

 Score = 50.8 bits (116), Expect = 6e-07
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRK 422
           GV+F  SPRQ D MI+ GTLTNKM PALRK
Sbjct: 26  GVIFHPSPRQSDCMIITGTLTNKMVPALRK 55


>07_01_0122 - 926971-927378
          Length = 135

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -1

Query: 508 VVFRASPRQXDVMIVAGTLTNKMAPALRK 422
           V+FR SPRQ D MI+ GTLTNKM PAL K
Sbjct: 80  VIFRPSPRQSDCMIIVGTLTNKMGPALGK 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,744,525
Number of Sequences: 37544
Number of extensions: 233085
Number of successful extensions: 446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)