Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32349
         (511 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111517-1|AAI11518.1|  213|Homo sapiens NDUFS7 protein protein.      174   1e-43
BC005954-1|AAH05954.1|  213|Homo sapiens NADH dehydrogenase (ubi...   174   1e-43
BC001715-1|AAH01715.2|  208|Homo sapiens NDUFS7 protein protein.      174   1e-43
AK222738-1|BAD96458.1|  213|Homo sapiens NADH-ubiquinone oxidore...   174   1e-43
AF115969-1|AAP97240.1|  213|Homo sapiens NADH:ubiquinone oxidore...   174   1e-43
AC005329-1|AAC27669.1|  158|Homo sapiens NUKM_HUMAN, partial CDS...   174   1e-43
AK092169-1|BAC03820.1|  213|Homo sapiens protein ( Homo sapiens ...   122   7e-28
AF060512-1|AAG43130.1|  214|Homo sapiens My017 protein protein.        86   6e-17
AK128713-1|BAC87587.1|  155|Homo sapiens C 1.6.5.3).  protein.         62   8e-10

>BC111517-1|AAI11518.1|  213|Homo sapiens NDUFS7 protein protein.
          Length = 213

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 107 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 166

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 167 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212


>BC005954-1|AAH05954.1|  213|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q
           reductas protein.
          Length = 213

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 107 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 166

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 167 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212


>BC001715-1|AAH01715.2|  208|Homo sapiens NDUFS7 protein protein.
          Length = 208

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 102 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 161

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 162 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 207


>AK222738-1|BAD96458.1|  213|Homo sapiens NADH-ubiquinone
           oxidoreductase Fe-S protein 7 variant protein.
          Length = 213

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 107 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 166

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 167 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212


>AF115969-1|AAP97240.1|  213|Homo sapiens NADH:ubiquinone
           oxidoreductase PSST subunit protein.
          Length = 213

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 107 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 166

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 167 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 212


>AC005329-1|AAC27669.1|  158|Homo sapiens NUKM_HUMAN, partial CDS
           protein.
          Length = 158

 Score =  174 bits (424), Expect = 1e-43
 Identities = 80/106 (75%), Positives = 89/106 (83%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 52  GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 111

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDRIVPVDIY+PGCPP AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 112 VRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYR 157


>AK092169-1|BAC03820.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34850 fis, clone NT2NE2011758, highly similar to
           NADH-UBIQUINONE OXIDOREDUCTASE 20 KDA SUBUNIT PRECURSOR
           (EC ).
          Length = 213

 Score =  122 bits (294), Expect = 7e-28
 Identities = 58/76 (76%), Positives = 62/76 (81%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN           
Sbjct: 114 GVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSV 173

Query: 331 XXGCDRIVPVDIYVPG 284
             GCDRIVPVDIY+PG
Sbjct: 174 VRGCDRIVPVDIYIPG 189


>AF060512-1|AAG43130.1|  214|Homo sapiens My017 protein protein.
          Length = 214

 Score = 86.2 bits (204), Expect = 6e-17
 Identities = 55/109 (50%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ DVMIVAGTLTNKMAPALRK     PD    +  G               
Sbjct: 107 GVVFRASPRQSDVMIVAGTLTNKMAPALRK-SPPRPDAGAAL-RGLHGELRQRGRLLPLF 164

Query: 331 XXGCDRIVPVDI---YVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             G + + P        P  P  AEALLYG+LQLQ+KIKR + +Q+WYR
Sbjct: 165 LLGGEGLRPHRARGHLHPRLPTTAEALLYGILQLQRKIKRERRLQIWYR 213


>AK128713-1|BAC87587.1|  155|Homo sapiens C 1.6.5.3).  protein.
          Length = 155

 Score = 62.5 bits (145), Expect = 8e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKV 419
           GVVFRASPRQ DVMIVAGTLTNKMAPALRKV
Sbjct: 114 GVVFRASPRQSDVMIVAGTLTNKMAPALRKV 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,370,765
Number of Sequences: 237096
Number of extensions: 1392232
Number of successful extensions: 6191
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6191
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)