Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32349
         (511 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79758-2|CAB02132.1|  199|Caenorhabditis elegans Hypothetical pr...   166   7e-42
AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    29   2.0  
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    27   7.9  

>Z79758-2|CAB02132.1|  199|Caenorhabditis elegans Hypothetical
           protein W10D5.2 protein.
          Length = 199

 Score =  166 bits (404), Expect = 7e-42
 Identities = 75/106 (70%), Positives = 86/106 (81%)
 Frame = -1

Query: 511 GVVFRASPRQXDVMIVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXX 332
           GVVFRASPRQ D++ VAGT+TNKMAPALR++YDQMP+ +WVISMGSCAN           
Sbjct: 93  GVVFRASPRQADLIFVAGTVTNKMAPALRRIYDQMPEAKWVISMGSCANGGGYYHYAYSV 152

Query: 331 XXGCDRIVPVDIYVPGCPPXAEALLYGVLQLQKKIKRMKTIQVWYR 194
             GCDR++PVDIYVPGCPP AEALLYGVLQLQKKIKR +  Q+WYR
Sbjct: 153 LRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKKIKRKREAQLWYR 198


>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = -3

Query: 221 NENYSSVV*ELIDPIIVYVNKIMLITYMLLVNFSLIIN 108
           NENY  V+  L+ P++VY+  ++L++   ++NF ++ N
Sbjct: 199 NENYHRVLDNLLYPLLVYLVPLLLLS---VLNFRILSN 233


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 366 LAQLPIEITHLGSGIWSYTFLKAGAILFVK 455
           L Q+PI+I  LG+ IW Y    +G ++  K
Sbjct: 551 LGQIPIKIKSLGNKIWYYKNDYSGGVISSK 580


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,651,923
Number of Sequences: 27780
Number of extensions: 225378
Number of successful extensions: 491
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)