Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32346
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL358976-3|CAH70589.1|  561|Homo sapiens doublesex and mab-3 rel...    30   6.5  
AF284225-1|AAF86295.1|  561|Homo sapiens DMRT2/terra-like protei...    30   6.5  
AF284224-2|AAF86294.1|  328|Homo sapiens terra-like protein prot...    30   6.5  
AF284223-2|AAF86292.1|  328|Homo sapiens terra-like protein prot...    30   6.5  

>AL358976-3|CAH70589.1|  561|Homo sapiens doublesex and mab-3
           related transcription factor 2 protein.
          Length = 561

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 91  SPDCSNFPKI--TRYYAATGTSLTCYCRXNHRGPELAAMPVRHHPYHSV 231
           SP   NF  I  T   AA G  LT   + N R P    +P+RH+P+HS+
Sbjct: 430 SPPRRNFSPIVDTDSLAAQGHVLTKISKENTRHP----LPLRHNPFHSL 474


>AF284225-1|AAF86295.1|  561|Homo sapiens DMRT2/terra-like protein
           protein.
          Length = 561

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 91  SPDCSNFPKI--TRYYAATGTSLTCYCRXNHRGPELAAMPVRHHPYHSV 231
           SP   NF  I  T   AA G  LT   + N R P    +P+RH+P+HS+
Sbjct: 430 SPPRRNFSPIVDTDSLAAQGHVLTKISKENTRHP----LPLRHNPFHSL 474


>AF284224-2|AAF86294.1|  328|Homo sapiens terra-like protein
           protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 91  SPDCSNFPKI--TRYYAATGTSLTCYCRXNHRGPELAAMPVRHHPYHSV 231
           SP   NF  I  T   AA G  LT   + N R P    +P+RH+P+HS+
Sbjct: 197 SPPRRNFSPIVDTDSLAAQGHVLTKISKENTRHP----LPLRHNPFHSL 241


>AF284223-2|AAF86292.1|  328|Homo sapiens terra-like protein
           protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 91  SPDCSNFPKI--TRYYAATGTSLTCYCRXNHRGPELAAMPVRHHPYHSV 231
           SP   NF  I  T   AA G  LT   + N R P    +P+RH+P+HS+
Sbjct: 197 SPPRRNFSPIVDTDSLAAQGHVLTKISKENTRHP----LPLRHNPFHSL 241


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,778,869
Number of Sequences: 237096
Number of extensions: 1678917
Number of successful extensions: 2951
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2951
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)