Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32346
         (670 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical p...    28   5.2  
U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...    28   5.2  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      27   9.1  

>Z66521-18|CAO82066.1|  134|Caenorhabditis elegans Hypothetical
           protein W02B12.15b protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 300 IKNDCCWSVPVHASIMSLFT 359
           I++ CCW+ P H S+  L T
Sbjct: 12  IQDHCCWTTPQHCSVAELGT 31


>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 632 MSNILGVDCML-PEVNSGLCCQNGQL 558
           ++ I G +C   PE+NS LC QNG L
Sbjct: 211 VTTICGCECEKHPEINSRLCHQNGHL 236


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 300 IKNDCCWSVPVHASIMSLFT 359
           I++ CCW+ P H S+  L T
Sbjct: 12  IQDHCCWTTPQHCSVAELGT 31


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 635 VMSNILGVDCMLPEVNSGLCCQN 567
           V SN+  V+  LP  ++G+CC N
Sbjct: 571 VFSNLRNVNTRLPPESNGVCCSN 593


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 635 VMSNILGVDCMLPEVNSGLCCQN 567
           V SN+  V+  LP  ++G+CC N
Sbjct: 571 VFSNLRNVNTRLPPESNGVCCSN 593


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 635 VMSNILGVDCMLPEVNSGLCCQN 567
           V SN+  V+  LP  ++G+CC N
Sbjct: 571 VFSNLRNVNTRLPPESNGVCCSN 593


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,202,245
Number of Sequences: 27780
Number of extensions: 264144
Number of successful extensions: 553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)