Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32343
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 330 5e-91
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 330 5e-91
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 330 5e-91
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 7e-22
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 53 2e-07
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 48 4e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 48 7e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 48 7e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 48 7e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.007
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.007
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.84
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 1.1
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.5
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 1.9
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 29 2.6
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 4.5
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 4.5
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 4.5
AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical ... 28 5.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 330 bits (811), Expect = 5e-91
Identities = 153/201 (76%), Positives = 172/201 (85%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
KIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKN
Sbjct: 221 KIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKN 280
Query: 182 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAE 361
VSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E
Sbjct: 281 VSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNE 340
Query: 362 IKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 541
+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVA
Sbjct: 341 LKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVA 400
Query: 542 VGVIKAVNFKEAGGGKVTKAA 604
VGVIK+V + GKVTK+A
Sbjct: 401 VGVIKSVEKSDGSSGKVTKSA 421
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 330 bits (811), Expect = 5e-91
Identities = 153/201 (76%), Positives = 172/201 (85%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
KIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKN
Sbjct: 255 KIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKN 314
Query: 182 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAE 361
VSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E
Sbjct: 315 VSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNE 374
Query: 362 IKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 541
+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVA
Sbjct: 375 LKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVA 434
Query: 542 VGVIKAVNFKEAGGGKVTKAA 604
VGVIK+V + GKVTK+A
Sbjct: 435 VGVIKSVEKSDGSSGKVTKSA 455
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 330 bits (811), Expect = 5e-91
Identities = 153/201 (76%), Positives = 172/201 (85%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
KIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFNVKN
Sbjct: 255 KIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFNVKN 314
Query: 182 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAE 361
VSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E
Sbjct: 315 VSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNE 374
Query: 362 IKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 541
+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVA
Sbjct: 375 LKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVA 434
Query: 542 VGVIKAVNFKEAGGGKVTKAA 604
VGVIK+V + GKVTK+A
Sbjct: 435 VGVIKSVEKSDGSSGKVTKSA 455
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 100 bits (240), Expect = 7e-22
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
K +GTV +G++E+G ++ G +V P +V + + V GDN+ F +K
Sbjct: 347 KYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKG 406
Query: 182 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAE 361
+ EL+ G++ S ++ K F A+V+VL H I++GY+ VL +A
Sbjct: 407 IEENELQGGFII-CSPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKG 465
Query: 362 IKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 541
+ +D++TG+ K +K + I+ L +P +E F+E+P LGRF +RD +T+A
Sbjct: 466 VIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIA 523
Query: 542 VG-VIKAV 562
+G V+K V
Sbjct: 524 IGKVLKVV 531
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPGDNVGFN 172
+ G+GT+ G + +G ++ I++ P + + +KS+ + G + F
Sbjct: 383 VDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCGQSASFA 442
Query: 173 VKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACK 352
+K + K++R+G V D K P F A+++VL+HP I Y +L +
Sbjct: 443 LKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAMLHIGSVRQTAT 501
Query: 353 FAEIKEKVDRRTGKSTEVNPKSIK 424
+ ++V RTG +V K I+
Sbjct: 502 LVSMGKEV-LRTGDRDKVQFKFIR 524
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 48.4 bits (110), Expect = 4e-06
Identities = 35/188 (18%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
K+ V G++E+G ++ V+ +++T +++ + GD + ++
Sbjct: 402 KVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYILLTLQG 460
Query: 182 VSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA 358
E ++ G V + + + F +++ I G L H+ + C F
Sbjct: 461 TFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFT 520
Query: 359 EIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 538
+ +++ G+ + P+ I G +A+V + + +E+F LGR R T+
Sbjct: 521 NLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTI 580
Query: 539 AVGVIKAV 562
A G+++ V
Sbjct: 581 AAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 48.4 bits (110), Expect = 4e-06
Identities = 35/188 (18%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Frame = +2
Query: 2 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
K+ V G++E+G ++ V+ +++T +++ + GD + ++
Sbjct: 420 KVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHCFAGDYILLTLQG 478
Query: 182 VSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA 358
E ++ G V + + + F +++ I G L H+ + C F
Sbjct: 479 TFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFT 538
Query: 359 EIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 538
+ +++ G+ + P+ I G +A+V + + +E+F LGR R T+
Sbjct: 539 NLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTI 598
Query: 539 AVGVIKAV 562
A G+++ V
Sbjct: 599 AAGIVEKV 606
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 47.6 bits (108), Expect = 7e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 169
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 262 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 321
Query: 170 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 349
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 322 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 377
Query: 350 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 526
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 378 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 424
Query: 527 RQTVAVGVIKAV 562
+T+ GV V
Sbjct: 425 AKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 47.6 bits (108), Expect = 7e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 169
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 263 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 322
Query: 170 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 349
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 323 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 378
Query: 350 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 526
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 379 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 425
Query: 527 RQTVAVGVIKAV 562
+T+ GV V
Sbjct: 426 AKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 47.6 bits (108), Expect = 7e-06
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDNVGF 169
I G GTV G++E G+LK G I + T VKSV E + + +A PGD +G
Sbjct: 263 IVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQLGV 322
Query: 170 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 349
++ + K++RRG V + + K AQ+ VL TP+ + + H+
Sbjct: 323 LLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFSEHVF- 378
Query: 350 KFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 526
+ +G S + K + G++A V L + + +E P RF +R
Sbjct: 379 -------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRFTIRKG 425
Query: 527 RQTVAVGVIKAV 562
+T+ GV V
Sbjct: 426 AKTIGTGVFTDV 437
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 178
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 179 NVSVKELRRGYVAG 220
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.007
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 178
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 179 NVSVKELRRGYVAG 220
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.091
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Frame = +2
Query: 14 IGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQEAVPGDNVGFNVKN 181
+G V G + G L G V+ P T V S+ +A+ PG+ ++
Sbjct: 416 VGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPGEAASISLNL 475
Query: 182 VSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 286
LRRG V + + PP +FTA +++L H
Sbjct: 476 PDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 175
I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 212 IKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 5 IGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 175
I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 171 IKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 227
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 30.3 bits (65), Expect = 1.1
Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 3/135 (2%)
Frame = -3
Query: 405 TSVDLPVRRSTFSLISANLQAMWAVWQSNTGV*PFEI*PGWLSTMT*AVKSAAPLGGLFL 226
T+ P S F A A A ++TG F G ST T A S AP GGLF
Sbjct: 412 TTTSAPATGSLFGTAPATTTATSAAPAASTGG-LF----GASSTTTPA--STAPTGGLFG 464
Query: 225 ESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CISTDLTSVVMLAGAKTTMVPGF 55
+ T P + T F T +P T +T + L +T+
Sbjct: 465 AATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATP 524
Query: 54 NTPVSTLPTGTVPIP 10
+ P +T T T+P P
Sbjct: 525 SLPTTTSTTSTLPKP 539
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = -3
Query: 270 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 91
T A +AAP GGLF + T P T F T +P TA+ + T +
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527
Query: 90 LAGAKTTMVPGFNTPVSTLPT 28
+ T+ +P P PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 56 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 181
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +1
Query: 439 HCQLGTFQASMC-RVLPGIPTPRSFC----CP*HEADSCCRSHQGCQLQRGW 579
HC Q+S V G+ PR C CP E CRS+ C+ +GW
Sbjct: 1702 HCPSNYTQSSCATNVCEGVCGPRGSCKTVPCPKDEPH--CRSYSFCECDKGW 1751
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = -2
Query: 553 DDSDSNCLPHVTDSKTTEGWE 491
D++ +N LPH+++ + TEG+E
Sbjct: 42 DETSTNFLPHISEREVTEGYE 62
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = -2
Query: 553 DDSDSNCLPHVTDSKTTEGWE 491
D++ +N LPH+++ + TEG+E
Sbjct: 44 DETSTNFLPHISEREVTEGYE 64
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 320 LDCHTAHIACKFAEIKEKVDRRTGKSTE 403
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 320 LDCHTAHIACKFAEIKEKVDRRTGKSTE 403
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 320 LDCHTAHIACKFAEIKEKVDRRTGKSTE 403
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AF025463-1|AAB71008.3| 871|Caenorhabditis elegans Hypothetical
protein K10B4.3 protein.
Length = 871
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = -2
Query: 358 CKFAGNVGSVAIQYWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNITTTQFLDGHV 179
CK N+G V+ V +L M ++N +I T+ + + S T+ L HV
Sbjct: 298 CKIIANIGRVSSPLASEAVDELVLMARNNSSDQQILQTVLNEIDAIGSIHPTS--LRRHV 355
Query: 178 LYVETYIVSRYSFLESFVVHLH 113
+ +T SR +E + HL+
Sbjct: 356 SFFQTLPTSR--IIERILAHLN 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,000
Number of Sequences: 27780
Number of extensions: 365935
Number of successful extensions: 1157
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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