Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32340
         (572 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm rec...    34   0.062
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical pr...    27   7.2  

>AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm
           receptor protein 206 protein.
          Length = 364

 Score = 34.3 bits (75), Expect = 0.062
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +3

Query: 36  LVCETIVEIALDHKAMHCEMASVLISDLYGRVFSAKDIGYAFERLLEKLPDLVL 197
           LVC+T++ I+L H  +    +  L++  +GR+ +   I  AF   ++ LP +++
Sbjct: 255 LVCQTVIPISLMHFPLLISYSGALLNRGFGRLSNLASITIAFYPAIDPLPSILI 308


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 111 SDLYGRVFSAKDIGYAFERLLEKLPDLVLDTPDAALLLSNFI 236
           +DLY  + S  +I   F+  +++ PDL  D P+   L +NF+
Sbjct: 704 ADLYRMINSCDEISNLFKTAIDRCPDLP-DLPEFGELSANFV 744


>Z92817-3|CAJ43914.1|  511|Caenorhabditis elegans Hypothetical
           protein W08G11.3b protein.
          Length = 511

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 504 EVPHFHHELVYETILLALETINS 572
           E P  H+E+  ETI +A+ETI +
Sbjct: 307 EKPAVHNEMTVETIYIAIETIKT 329


>Z92817-2|CAJ43913.1|  510|Caenorhabditis elegans Hypothetical
           protein W08G11.3a protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +3

Query: 504 EVPHFHHELVYETILLALETINS 572
           E P  H+E+  ETI +A+ETI +
Sbjct: 306 EKPAVHNEMTVETIYIAIETIKT 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,501,209
Number of Sequences: 27780
Number of extensions: 140631
Number of successful extensions: 480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)