Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32335
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.          218   3e-59
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   2.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score =  218 bits (532), Expect = 3e-59
 Identities = 98/126 (77%), Positives = 113/126 (89%)
 Frame = +2

Query: 68  MSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFXNESLLTSGG 247
           MS QDYVDKQL+ASRCVTKAAIAGHDGN+WAKSEGFE+SK+E+ K+V GF  + +LTS G
Sbjct: 1   MSCQDYVDKQLLASRCVTKAAIAGHDGNLWAKSEGFEVSKEELTKLVQGFEEQDILTSSG 60

Query: 248 VTIAGTRYIYLSGTXHIIXAKLGKXGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEY 427
           VT+AG RYIYLSGT  +I AKLGK GVHCMKT QAVV+SLYE+PIQPQQAASVVEKLG+Y
Sbjct: 61  VTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEKLGDY 120

Query: 428 LITCGY 445
           L++CGY
Sbjct: 121 LVSCGY 126


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 182 SKDEVAKIVAGFXNESLLTSGGVTIAGTRYIYLSGTXHIIXAKLGKXGVHCMK 340
           +K E+  IV GF  +  L S    + G   IYL+   +I+   +   G +  K
Sbjct: 16  TKSEINDIV-GFLKKGPLDSNVEVVVGVPSIYLTYAKNILPNNISIAGQNTYK 67


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -3

Query: 167 PTL-PTHCHHDRQWQLL*HI 111
           PT+ P H HH  Q Q L H+
Sbjct: 345 PTMGPPHHHHHHQTQSLQHL 364


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +2

Query: 80  DYVDKQLMASRCVTKAAIAGHDGN 151
           D +   L   RC  K    G DGN
Sbjct: 447 DVISGNLEKGRCTGKIVTVGSDGN 470


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 329 HCMKTQQAVVIS 364
           HC+ T+Q+VV++
Sbjct: 822 HCVTTEQSVVVT 833


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 157 PHIAIMTGNGSFCDTSRCH 101
           PH  ++ G  +  DTS+ H
Sbjct: 259 PHDQVIIGGSNGLDTSKVH 277


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
 Frame = -3

Query: 176 RSLPTLPTHC---HHDRQWQL 123
           ++LP LP H    HHD +W++
Sbjct: 502 KTLP-LPQHLPRIHHDAEWKV 521


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
 Frame = -3

Query: 176 RSLPTLPTHC---HHDRQWQL 123
           ++LP LP H    HHD +W++
Sbjct: 417 KTLP-LPQHLPRIHHDAEWKV 436


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
 Frame = -3

Query: 176 RSLPTLPTHC---HHDRQWQL 123
           ++LP LP H    HHD +W++
Sbjct: 736 KTLP-LPQHLPRIHHDAEWKV 755


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,002
Number of Sequences: 438
Number of extensions: 2477
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)