Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32332
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 93 5e-20
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 93 5e-20
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 93 5e-20
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 31 0.32
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 1.7
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 1.7
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 1.7
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 3.9
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 3.9
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 27 5.2
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 27 5.2
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 27 5.2
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 27 5.2
U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical pr... 27 5.2
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 27 5.2
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 27 5.2
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 27 5.2
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 27 5.2
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 27 5.2
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 6.9
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 6.9
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 6.9
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 6.9
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 6.9
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 6.9
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 6.9
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 26 9.1
U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone... 26 9.1
U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone... 26 9.1
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 26 9.1
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 93.5 bits (222), Expect = 5e-20
Identities = 48/79 (60%), Positives = 51/79 (64%)
Frame = +3
Query: 168 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 347
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 348 YAILGFALSEAMGLFCLMM 404
YAILGFALSEAMGLFCL M
Sbjct: 66 YAILGFALSEAMGLFCLTM 84
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 93.5 bits (222), Expect = 5e-20
Identities = 48/79 (60%), Positives = 51/79 (64%)
Frame = +3
Query: 168 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 347
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 6 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65
Query: 348 YAILGFALSEAMGLFCLMM 404
YAILGFALSEAMGLFCL M
Sbjct: 66 YAILGFALSEAMGLFCLTM 84
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 93.5 bits (222), Expect = 5e-20
Identities = 48/79 (60%), Positives = 51/79 (64%)
Frame = +3
Query: 168 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 347
A R TT KDIDSAAK+ FG+L+IGYARNPSLKQQLFS
Sbjct: 30 AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89
Query: 348 YAILGFALSEAMGLFCLMM 404
YAILGFALSEAMGLFCL M
Sbjct: 90 YAILGFALSEAMGLFCLTM 108
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 31.1 bits (67), Expect = 0.32
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = -1
Query: 284 CSNTS-SGTSYSHCRCTSTN-EFGSRVNVLSDRCGLEGPHCR---ELCRDSRYHLCMGGY 120
CS+ + S SHC T + RV ++ C P CR +LC SRY M Y
Sbjct: 296 CSHPAFSEVMASHCSLTCGRCDEVERVEEGTEDCEDMTPDCRNYRDLCEHSRYKTLMENY 355
Query: 119 CCKWSHQC 96
C K C
Sbjct: 356 CPKACGHC 363
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +2
Query: 95 CTGATTCSSTHPYTDGTCCPYTALCSAVLP 184
C+ C + D CCPY + C A P
Sbjct: 189 CSATKPCPNGFSCNDKKCCPYASACPAGAP 218
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 35 NAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 160
N C P + C+ T C+S + +G CCP T
Sbjct: 106 NTQCGSNSSPQVSASGQVVTCSTNTQCASGYTCNNGACCPNT 147
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 1.7
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = -1
Query: 389 QTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSR 213
Q+ S + G +G + L G G D+ + CS S G + S C C +
Sbjct: 1512 QSCSCQNGAHCDGADGRCLCPAGFQG---DKCEQKCSEGSFGPACSQQCNCGKYKCDATD 1568
Query: 212 VNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQC 96
+ G GP C E CR RY G C+ QC
Sbjct: 1569 GKCICP-VGRHGPLCEEECRPGRY-----GQSCQNKCQC 1601
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.7 bits (61), Expect = 1.7
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = -1
Query: 389 QTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSR 213
Q+ S + G +G + L G G D+ + CS S G + S C C +
Sbjct: 1512 QSCSCQNGAHCDGADGRCLCPAGFQG---DKCEQKCSEGSFGPACSQQCNCGKYKCDATD 1568
Query: 212 VNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQC 96
+ G GP C E CR RY G C+ QC
Sbjct: 1569 GKCICP-VGRHGPLCEEECRPGRY-----GQSCQNKCQC 1601
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 86 LQLCTGATTCSSTHPYTDGTCCPYTA 163
+Q C+G C TH + CCP A
Sbjct: 373 VQRCSGKEHCPETHDCKNTVCCPKPA 398
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 95 CTGATTCSSTHPYTDGTCC-PYTALCSAVLPDHIGH*GH*LCCQIHWCWCSDSGSS 259
C T+C + P++ G CC +C A G+ C + C G S
Sbjct: 797 CPSTTSCYAPTPFSSGLCCASIDEVCPATFIYEEEKSGNEQCSPLEKNTCGQDGQS 852
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -1
Query: 284 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 156
C NT TS S+C C + S + L P C++ C
Sbjct: 51 CHNTQQSTSASNCNCVLKSNSKSVPVTIKVSTKLCAPACQQSC 93
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 41 VCRQT-DRPCSQVCHLLQLCTGATT---CSSTHPYTDGTCC 151
+C+QT C Q ++ C +++ CSS + G+CC
Sbjct: 330 ICQQTCQNTCQQAAQIVVPCQSSSSGCGCSSGYSQCGGSCC 370
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 160 CVGTAGTICVWVGTAASG-RTSAELQK 83
CVG GT+C + +G +TS +LQK
Sbjct: 375 CVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 160 CVGTAGTICVWVGTAASG-RTSAELQK 83
CVG GT+C + +G +TS +LQK
Sbjct: 416 CVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 160 CVGTAGTICVWVGTAASG-RTSAELQK 83
CVG GT+C + +G +TS +LQK
Sbjct: 375 CVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 160 CVGTAGTICVWVGTAASG-RTSAELQK 83
CVG GT+C + +G +TS +LQK
Sbjct: 416 CVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 230 WCWCSDSGSSWFRSWYWNSLRLPHH 304
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>U23139-2|AAL02483.1| 460|Caenorhabditis elegans Hypothetical
protein F13H8.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 124 PPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNS 228
PP+ YL ++ +S C PSR R LR + +S
Sbjct: 368 PPVECPYLRTIQNSENCEPSREMRFLRVPSAFASS 402
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 32 QNAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 160
QN C P + C + C+S + ++G CCP T
Sbjct: 72 QNTQCGTNSSPQVSASGQVVTCFTNSQCASGYICSNGACCPNT 114
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 140 HLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQ 3
++C G CC ++ + G P G S G Q F + G R Q
Sbjct: 103 YICSNGACCPNTNSNTCSTTGTPCFTGQISVGGQCFNSVNIGDRCQ 148
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 122 YCCKWSHQCRVAEDGRPGCR 63
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 230 WCWCSDSGSSWFRSWYWNSLRLPHH 304
WC + S SSW + W + L HH
Sbjct: 19 WCNMNISQSSWIKCRDWMAFALSHH 43
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 122 YCCKWSHQCRVAEDGRPGCR 63
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 122 YCCKWSHQCRVAEDGRPGCR 63
Y C++S +CR+ + GR CR
Sbjct: 87 YVCRYSKKCRIDKAGRNVCR 106
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 92 LCTGATTCSSTHPYTDGTCCPYTALC 169
LC TTC D CP ALC
Sbjct: 575 LCANGTTCREDRVKCDKRPCPIRALC 600
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 137 LCMGGYCCKWSHQCRVAEDGRPGCRGDQS 51
LC G CC WS C + + C G QS
Sbjct: 698 LCEGQSCCNWSEWCHWSMCDKE-CGGGQS 725
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1063 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1122
Query: 221 GSRVNV 204
VNV
Sbjct: 1123 KVTVNV 1128
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1097 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1156
Query: 221 GSRVNV 204
VNV
Sbjct: 1157 KVTVNV 1162
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1034 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1093
Query: 221 GSRVNV 204
VNV
Sbjct: 1094 KVTVNV 1099
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1168 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1227
Query: 221 GSRVNV 204
VNV
Sbjct: 1228 KVTVNV 1233
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1063 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1122
Query: 221 GSRVNV 204
VNV
Sbjct: 1123 KVTVNV 1128
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1097 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1156
Query: 221 GSRVNV 204
VNV
Sbjct: 1157 KVTVNV 1162
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1034 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1093
Query: 221 GSRVNV 204
VNV
Sbjct: 1094 KVTVNV 1099
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1168 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1227
Query: 221 GSRVNV 204
VNV
Sbjct: 1228 KVTVNV 1233
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 748 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 807
Query: 221 GSRVNV 204
VNV
Sbjct: 808 KVTVNV 813
>Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical
protein ZK643.6 protein.
Length = 180
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -1
Query: 296 GAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLC----M 129
G ++C++ ++ SY+ RC S E+ S ++ L C C +C D+ +C
Sbjct: 103 GTQECTDLANDCSYNQNRC-SVKEYSSLMHRL---CPKTCNAC-NICEDAN-KMCPIWVP 156
Query: 128 GGYCCKWSH 102
G+C K+ H
Sbjct: 157 RGFCSKFDH 165
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -1
Query: 398 KTEQTHSLRQ-GETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEF 222
KTE ++ + NG + +P I DDE D + +S+ S S R + N
Sbjct: 1097 KTENKQLKKEVDKLTNGPATRASSRASIPVIYDDEHVYDAACSSTSASQSSKRSSGCNSI 1156
Query: 221 GSRVNV 204
VNV
Sbjct: 1157 KVTVNV 1162
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 128 PYTDGTCCPYTALC 169
P+T GTCCP T C
Sbjct: 52 PFTGGTCCPGTNHC 65
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 26.2 bits (55), Expect = 9.1
Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Frame = -1
Query: 296 GAEDCSNTSSGTSYSHC-------RC----TSTNEFGSRVNVLSDRC--GLEGPHCRELC 156
G E C TSSG HC C S F + N +C G G +C +L
Sbjct: 1704 GDEICDCTSSGWLGDHCEIQPKLDNCLYCQNSVKCFDTFTNYSRCQCAPGFSGDYCSDLI 1763
Query: 155 RDSRYHLCMGGYCC 114
D + C G C
Sbjct: 1764 DDCFFEPCFNGGTC 1777
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 110 TCSSTHPYTDGTCCPYTALCSAVLPDHIG 196
+CS + + GTC Y A C A LP G
Sbjct: 1964 SCSDINCFNGGTCIDYNATC-ACLPGTTG 1991
>U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform b protein.
Length = 434
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 122 YCCKWSHQCRVAEDGRPGCR 63
Y C+++ QC + +D R CR
Sbjct: 54 YTCRFNKQCNIDKDHRNACR 73
>U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform a protein.
Length = 435
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 122 YCCKWSHQCRVAEDGRPGCR 63
Y C+++ QC + +D R CR
Sbjct: 54 YTCRFNKQCNIDKDHRNACR 73
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +2
Query: 74 VCHLLQLCTGATTCSSTHPYTD--GTCCPYTA-LCS 172
VC Q+C G C+S + + CCP A +CS
Sbjct: 743 VCSTTQVCPGTHECTSVNSGSSVVNRCCPTRAYICS 778
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,067,930
Number of Sequences: 27780
Number of extensions: 222525
Number of successful extensions: 921
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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