Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32332
(407 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 4.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.1
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 5.4
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 5.4
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 21 7.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 9.4
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 51 WRQTAFCFYKVRRATTK 1
W Q FC+++ AT K
Sbjct: 533 WFQNTFCYFRRNAATWK 549
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 4.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 145 LLSLHSSLQCGPSRPHRSLRTLTLLPNS 228
+L ++ L C + +S+R +T LP++
Sbjct: 208 MLGIYCRLYCYAQKHVKSIRAVTKLPDT 235
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 4.1
Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
Frame = +1
Query: 115 QQYP-PIHRWY 144
Q +P P+HRWY
Sbjct: 237 QGFPVPVHRWY 247
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 349 TPFWVSPCLRLW 384
TPF V P L++W
Sbjct: 183 TPFTVLPLLKVW 194
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 349 TPFWVSPCLRLW 384
TPF V P L++W
Sbjct: 183 TPFTVLPLLKVW 194
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 20.6 bits (41), Expect = 7.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 401 HKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNT 273
++T QTH + E G+ ++ +G V EGA S T
Sbjct: 41 YQTLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTT 83
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 333 QQLFSYAILGFALSEAMGLFCLMMA 407
Q L SYA+ GF L M C+ ++
Sbjct: 443 QLLDSYAVSGFCLLFLMFFECIAIS 467
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 333 QQLFSYAILGFALSEAMGLFCLMMA 407
Q L SYA+ GF L M C+ ++
Sbjct: 496 QLLDSYAVSGFCLLFLMFFECIAIS 520
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 451 ILCRAPHII 459
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 519 ILCRAPHII 527
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 9.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 1 LCCRAPHLI 27
+ CRAPH+I
Sbjct: 519 ILCRAPHII 527
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 151 TAGTICVWVGTAASGRTSAE 92
+AGT C W+ + SA+
Sbjct: 26 SAGTSCKWLSEGGNDTRSAD 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,068
Number of Sequences: 438
Number of extensions: 2623
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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