Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32320
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.2  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   9.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 214 KCDVKCSQKLLTFTNGSWYKNHDGNANN 297
           K   K  + ++      WY NHD N  N
Sbjct: 191 KTSGKYKEYIIPANYSGWYLNHDYNLEN 218


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 214 KCDVKCSQKLLTFTNGSWYKNHDGNANN 297
           K   K  + ++      WY NHD N  N
Sbjct: 191 KTSGKYKEYIIPANYSGWYLNHDYNLEN 218


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 230 HFTSHFSVFMYSRLLVELR 174
           H T H S   YSRL  E++
Sbjct: 197 HSTIHLSTGNYSRLACEIQ 215


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 171 DVLTTWHCYHIGCIIYCESKVWLTWPS 91
           ++ T W  Y+I   +  E    LT PS
Sbjct: 167 NITTPWDYYYIYHTLVAEQSYGLTLPS 193


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 171 DVLTTWHCYHIGCIIYCESKVWLTWPS 91
           ++ T W  Y+I   +  E    LT PS
Sbjct: 182 NITTPWDYYYIYHTLVAEQSYGLTLPS 208


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 171 DVLTTWHCYHIGCIIYCESKVWLTWPS 91
           ++ T W  Y+I   +  E    LT PS
Sbjct: 70  NITTPWDYYYIYHTLVAEQSYGLTLPS 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,660
Number of Sequences: 438
Number of extensions: 3284
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)