Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32312
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 129 1e-30
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 129 1e-30
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 61 3e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 53 1e-07
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 53 1e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 51 4e-07
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 49 1e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 3e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 3e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 47 8e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 47 8e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 8e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 46 1e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 46 2e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 46 2e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 46 2e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 45 3e-05
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 45 3e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 45 3e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 45 3e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 44 4e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 44 4e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 44 4e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 44 4e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 44 4e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 44 4e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 44 4e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 44 4e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 44 5e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 44 5e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 44 7e-05
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 43 9e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 2e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 41 4e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 41 4e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 41 4e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 41 4e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 41 5e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 41 5e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 40 7e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 40 7e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 40 7e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 40 7e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 40 7e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 40 7e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 40 7e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 40 7e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 39 0.002
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 39 0.002
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.002
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 39 0.002
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.004
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.005
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.006
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.006
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 37 0.008
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 37 0.008
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 37 0.008
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.23
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 32 0.23
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 1.6
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 28 2.9
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 27 6.6
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 27 8.8
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 129 bits (311), Expect = 1e-30
Identities = 54/86 (62%), Positives = 72/86 (83%)
Frame = +2
Query: 113 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFE 292
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+E
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 293 RRDAEXTLDTMDGRMLDGRELXVQMA 370
RRDAE LD DG+++DGREL V +A
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 129 bits (311), Expect = 1e-30
Identities = 54/86 (62%), Positives = 72/86 (83%)
Frame = +2
Query: 113 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFE 292
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+E
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 293 RRDAEXTLDTMDGRMLDGRELXVQMA 370
RRDAE LD DG+++DGREL V +A
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 61.3 bits (142), Expect = 3e-10
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +2
Query: 128 IDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAE 307
+ G+ S+ V N ++TT E+L F G++ ++ I DR T RGFAF+ F E A+
Sbjct: 1 MSGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQ 60
Query: 308 XTLDTMDGRMLDGRELXVQMA 370
++ M+G +GR L V +A
Sbjct: 61 RAVEQMNGAEFNGRPLRVNLA 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 57.6 bits (133), Expect = 4e-09
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ V N ++TT +DL F + G V ++ I DR T RGFAFV F E A+ +D
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 323 MDGRMLDGRELXVQMA 370
+G +GR L V +A
Sbjct: 65 FNGVDFNGRALRVNLA 80
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 54.8 bits (126), Expect = 3e-08
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ V N+ Y+ T E++ F G V ++ I DR T RGFAFV F E A+ ++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 323 MDGRMLDGRELXVQMA 370
++G +GR L V A
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEX 310
DG L V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAER 207
Query: 311 TLDTMDGRMLDGRELXVQMA 370
+ G M++GR++ V A
Sbjct: 208 ARQELHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 52.8 bits (121), Expect = 1e-07
Identities = 29/80 (36%), Positives = 43/80 (53%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEX 310
DG L V N+ +R DL+ +FE+ G V D+ I + R S+GF FV +DAE
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAER 207
Query: 311 TLDTMDGRMLDGRELXVQMA 370
+ G M++GR++ V A
Sbjct: 208 ARQELHGSMIEGRKIEVNCA 227
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ L+++TT E+LR F R GEV + + RD T+ +RGF F+ F + + L+ +
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE- 107
Query: 332 RMLDGRELXVQMA 370
LDG+++ ++A
Sbjct: 108 HELDGKKIDPKVA 120
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRF 286
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/73 (32%), Positives = 43/73 (58%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ L+++TT E+LR F R GEV + + RD T+ +RGF F+ F + + L+ +
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNRE- 107
Query: 332 RMLDGRELXVQMA 370
LDG+++ ++A
Sbjct: 108 HELDGKKIDPKVA 120
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRF 286
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L V NL+Y T + + +F R G+V + + DR+ + GF FV ++ R DAE L
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQN 97
Query: 323 MDGRMLDGR 349
+ +D R
Sbjct: 98 ISNTRMDDR 106
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +2
Query: 110 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFF 289
G PP M SL + +L + L F G V I + RD +R S G+A+V F
Sbjct: 47 GYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Query: 290 ERRDAEXTLDTMDGRMLDGRELXV 361
+ DAE LDTM+ ++ GR + +
Sbjct: 107 QPADAERALDTMNFEVIHGRPMRI 130
Score = 33.9 bits (74), Expect = 0.058
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V N+ + LR F G + + D R S+GF FV F + +A +
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVT 401
Query: 320 TMDGRMLDGRELXVQMA 370
M+ +M+ + L V +A
Sbjct: 402 DMNSKMIGAKPLYVALA 418
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L +F + GE+ + D + +GF FV F ++ A ++ ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKLND 300
Query: 332 RMLDGRE 352
+L+G +
Sbjct: 301 SILEGTD 307
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 49.2 bits (112), Expect = 1e-06
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +2
Query: 110 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFF 289
G PP M SL + +L + L F G V I + RD +R S G+A+V F
Sbjct: 47 GYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
Query: 290 ERRDAEXTLDTMDGRMLDGRELXV 361
+ DAE LDTM+ ++ GR + +
Sbjct: 107 QPADAERALDTMNFEVIHGRPMRI 130
Score = 33.9 bits (74), Expect = 0.058
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V N+ + LR F G + + D R S+GF FV F + +A +
Sbjct: 343 VNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGR-SKGFGFVCFEKPEEATAAVT 401
Query: 320 TMDGRMLDGRELXVQMA 370
M+ +M+ + L V +A
Sbjct: 402 DMNSKMIGAKPLYVALA 418
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L +F + GE+ + D + +GF FV F ++ A ++ ++
Sbjct: 242 VKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKP-KGFGFVAFADQDAAGQAVEKLND 300
Query: 332 RMLDGRE 352
+L+G +
Sbjct: 301 SILEGTD 307
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE ++ M+G
Sbjct: 26 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 85
Query: 332 RMLDGRELXVQMA 370
+ L R + A
Sbjct: 86 QWLGRRTIRTNWA 98
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE ++ M+G
Sbjct: 36 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Query: 332 RMLDGRELXVQMA 370
+ L R + A
Sbjct: 96 QWLGRRTIRTNWA 108
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE ++ M+G
Sbjct: 139 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Query: 332 RMLDGRELXVQMA 370
+ L R + A
Sbjct: 199 QWLGRRTIRTNWA 211
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L V NL T + + +F + G V + D + +AFV F + A L T
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDG---SNDPYAFVEFSDHGQASQALQT 103
Query: 323 MDGRMLDGRELXVQMA 370
M+ R+L RE+ V A
Sbjct: 104 MNKRLLLDREMKVNWA 119
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V +L+ + LR F+ G+V D + RD T +S+G+ FV + +R +AE ++ M+G
Sbjct: 107 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 166
Query: 332 RMLDGRELXVQMA 370
+ L R + A
Sbjct: 167 QWLGRRTIRTNWA 179
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 48.0 bits (109), Expect = 3e-06
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +2
Query: 113 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFE 292
R P + V +L LR F + GEV + I RD T + +G+ FV +
Sbjct: 123 RSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPR 182
Query: 293 RRDAEXTLDTMDGRMLDGRELXVQMA 370
R DAE +D M+G L R + A
Sbjct: 183 REDAERAIDEMNGAWLGRRTIRTNWA 208
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 182 EDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGR 349
+++RR F+R G + ++ T + +G+AFV+F + A + M+ + G+
Sbjct: 269 DEIRRAFDRFGPINEV------RTFKIQGYAFVKFETKESAARAIVQMNNADIGGQ 318
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/75 (37%), Positives = 38/75 (50%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTM 325
L V NL+ TT +DLR VF GE+ + DR + SRGF F+ F DA D +
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 326 DGRMLDGRELXVQMA 370
LDG ++ V +
Sbjct: 138 CNTDLDGHKIRVDFS 152
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 173 TTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRE 352
TT EDL +F R G++ + I RDR + +S +AF+ F + E MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 353 LXVQMA 370
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 173 TTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRE 352
TT EDL +F R G++ + I RDR + +S +AF+ F + E MD ++D R
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 353 LXVQMA 370
+ V +
Sbjct: 312 IHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 173 TTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRE 352
TT EDL +F R G++ + I RDR + +S +AF+ F + E MD ++D R
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 242
Query: 353 LXVQMA 370
+ V +
Sbjct: 243 IHVDFS 248
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.8 bits (106), Expect = 8e-06
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +2
Query: 158 NLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRM 337
NL Y T +DL+ +F++ GEV ++ + D+ T +GFA V F A +DG +
Sbjct: 285 NLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYV 344
Query: 338 LDGRELXV 361
GR + +
Sbjct: 345 FKGRMMHI 352
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRES--RGFAFVRFFERRDAEXTLD 319
L V NL T + LR+ FE+ G++ D + +YT+E RGFAFV F + A L
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASL---KYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 320 TMDGRMLDGRELXVQ 364
+ + ++L V+
Sbjct: 62 KSNQTFFNSKKLTVE 76
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 98 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVF-ERXGE-VGDIYIPRDRYTRE---- 259
K S + I+ +L V NL + TT L +F +R G+ V I + E
Sbjct: 627 KSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKP 686
Query: 260 -SRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQMA 370
S GF FV+F+ DA+ L M G +LDG L ++++
Sbjct: 687 LSMGFGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIP-RDRYTRESRGFAFVRFFERRDAEXTLDT 322
L V NL + + +++ +FE G V I IP + ++ RGF FV F +A D+
Sbjct: 750 LLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFDS 809
Query: 323 M-DGRMLDGRELXVQMA 370
+ L GR L ++ A
Sbjct: 810 LVHSTHLYGRRLVLEWA 826
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +2
Query: 116 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFER 295
P + G L V NL +L+ +F G++ + Y+ +GFAF+R R
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 296 RDAEXTLDTMDGRMLDGRELXVQMA 370
AE + +DGR++ GR++ V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +2
Query: 116 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFER 295
P + G L V NL +L+ +F G++ + Y+ +GFAF+R R
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 296 RDAEXTLDTMDGRMLDGRELXVQMA 370
AE + +DGR++ GR++ V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V L Y T+ + L FE+ G++ + + DR T++SRG+ FV +R AE
Sbjct: 39 VGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD-PN 97
Query: 332 RMLDGRELXVQMA 370
++DGR+ V +A
Sbjct: 98 PIIDGRKANVNLA 110
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ V N+ Y T E++ + F G V + I DR++ +GFA+V F E+ + L
Sbjct: 79 SVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-A 137
Query: 323 MDGRMLDGRELXV 361
M +L GR++ V
Sbjct: 138 MTDSLLRGRQIKV 150
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + +
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP- 85
Query: 332 RMLDGRELXVQMA 370
++DG+ + + A
Sbjct: 86 HIIDGKTVDPKRA 98
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + +
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP- 85
Query: 332 RMLDGRELXVQMA 370
++DG+ + + A
Sbjct: 86 HIIDGKTVDPKRA 98
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F + + + +
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP- 85
Query: 332 RMLDGRELXVQMA 370
++DG+ + + A
Sbjct: 86 HIIDGKTVDPKRA 98
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M SL V +L L F G V I + RD TR S G+A+V F + DAE +
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 317 DTMDGRMLDGRELXV 361
DTM+ L G+ + +
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 35.9 bits (79), Expect = 0.014
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V NL + L++ FE G + + D R S+GF FV F + +A +
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 375
Query: 320 TMDGRMLDGRELXV 361
M+ +M+ + L V
Sbjct: 376 EMNSKMVCSKPLYV 389
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L +VF + G + + +S+GF FV F +AE + +
Sbjct: 217 VKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 332 RMLDGRELXVQM 367
++G +L + +
Sbjct: 275 STIEGTDLKLHV 286
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 44.8 bits (101), Expect = 3e-05
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRE-SRGFAFVRFFERRDAEXTLDTMD 328
+ NL+ L +F G + ++ +P DR+ RG+ +V + DAE ++ MD
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 329 GRMLDGRELXVQM 367
G +DG + V+M
Sbjct: 197 GGQIDGMAVHVEM 209
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M SL V +L L F G V I + RD TR S G+A+V F + DAE +
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 317 DTMDGRMLDGRELXV 361
DTM+ L G+ + +
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V NL + L++ FE G + + D R S+GF FV F + +A +
Sbjct: 257 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 315
Query: 320 TMDGRMLDGRELXVQMA 370
M+ +M+ + L V +A
Sbjct: 316 EMNSKMVCSKPLYVAIA 332
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L ++F + G + + +S+GF FV F +AE + +
Sbjct: 157 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 332 RMLDGRELXVQM 367
++G +L + +
Sbjct: 215 STIEGTDLKLHV 226
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/75 (36%), Positives = 37/75 (49%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M SL V +L L F G V I + RD TR S G+A+V F + DAE +
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 317 DTMDGRMLDGRELXV 361
DTM+ L G+ + +
Sbjct: 91 DTMNFEALHGKPMRI 105
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V NL + L++ FE G + + D R S+GF FV F + +A +
Sbjct: 317 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 375
Query: 320 TMDGRMLDGRELXVQMA 370
M+ +M+ + L V +A
Sbjct: 376 EMNSKMVCSKPLYVAIA 392
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L ++F + G + + +S+GF FV F +AE + +
Sbjct: 217 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 274
Query: 332 RMLDGRELXVQM 367
++G +L + +
Sbjct: 275 STIEGTDLKLHV 286
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
DL F G + + D+ T S+ F FV + + A + M+G + + L VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 365 M 367
+
Sbjct: 574 L 574
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
DL F G + + D+ T S+ F FV + + A + M+G + + L VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 365 M 367
+
Sbjct: 574 L 574
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.4 bits (100), Expect = 4e-05
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ L+Y + D+ VF + GEV +I + RD+ T +S+GFAF+ + ++R +D +G
Sbjct: 42 IGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNG 101
Query: 332 RMLDGRELXV 361
L R + V
Sbjct: 102 ISLHKRMIRV 111
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
DL F G + + D+ T S+ F FV + + A + M+G + + L VQ
Sbjct: 443 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 502
Query: 365 M 367
+
Sbjct: 503 L 503
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.4 bits (100), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
+ + V + + D RR+FE+ G V I RD+ T+ S+G FV F+ R+DA
Sbjct: 55 IKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQG 114
Query: 320 TMDG-RMLDGRELXVQM 367
+ ++++G VQM
Sbjct: 115 ALHNIKVIEGMHHPVQM 131
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
DL F G + + D+ T S+ F FV + + A + M+G + + L VQ
Sbjct: 514 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 573
Query: 365 M 367
+
Sbjct: 574 L 574
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V +L+ + E L+ F + GEV + + RD T++S+G+ FV F +++AE + M+G
Sbjct: 139 VGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNG 198
Query: 332 RMLDGRELXVQMA 370
+ + R + A
Sbjct: 199 KWIGKRAVRTNWA 211
Score = 35.9 bits (79), Expect = 0.014
Identities = 19/71 (26%), Positives = 41/71 (57%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ V N++ +TT DLR +F G++ ++ I + ++ +AFVR+ ++ A +
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFK------TQRYAFVRYEKKECATKAIME 291
Query: 323 MDGRMLDGREL 355
M+G+ + G ++
Sbjct: 292 MNGKEMAGNQV 302
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEX 310
DG L V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADR 154
Query: 311 TLDTMDGRMLDGRELXVQMA 370
+G ++GR + V +A
Sbjct: 155 ARAEFNGTTIEGRRVEVNLA 174
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/73 (26%), Positives = 41/73 (56%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ + N+ + +T E++ F+ G++ IP+D++T++ + FA++ F + E L
Sbjct: 56 SVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-V 114
Query: 323 MDGRMLDGRELXV 361
M+G + R + V
Sbjct: 115 MNGSLFRSRPIVV 127
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEX 310
DG L V N+ ++ DL +FE+ G V D+ I + R S+GF FV DA+
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADR 154
Query: 311 TLDTMDGRMLDGRELXVQMA 370
+G ++GR + V +A
Sbjct: 155 ARAEFNGTTIEGRRVEVNLA 174
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 43.6 bits (98), Expect = 7e-05
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEX 310
+ +L ++ L T E++R +F GE+ + RD+ T +S G+ FV + DA
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 311 TLDTMDGRMLDGRELXVQMA 370
+ + +G L + + V A
Sbjct: 99 AVSSFNGLRLQNKTIKVSYA 118
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 95 LKMSYGRPP-PRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGF 271
+K+SY RP +I G +L V + T +L +F G++ I D T S+G
Sbjct: 113 IKVSYARPSNDQIKGS-NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGV 171
Query: 272 AFVRFFERRDAEXTLDTMDGRMLDG 346
FVRF ++ +A+ + T++G + G
Sbjct: 172 GFVRFDKKDEADVAIKTLNGSIPSG 196
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 43.2 bits (97), Expect = 9e-05
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ V N+ +++T ++ F G+V + IP+D++T + FAFV F + + L
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-V 105
Query: 323 MDGRMLDGRELXVQM 367
+ G M R++ V +
Sbjct: 106 LSGTMFRNRKIMVTL 120
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +2
Query: 149 KVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDA 304
+V NL ++LR +F + G V I+I RD+ T +GFAFV F R DA
Sbjct: 179 RVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDA 230
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
S+ + N+ + +T E++ F+ G + IP+D++T++ + FA++ F + E L
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-V 120
Query: 323 MDGRMLDGRELXV 361
M+G + R + V
Sbjct: 121 MNGSLFRSRPIVV 133
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L V + Y T+ LRR FE G++ + + D + RG+AF+ + ++ +
Sbjct: 105 TLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAEMHTAYKK 163
Query: 323 MDGRMLDGRELXV 361
DG +DG+ L V
Sbjct: 164 ADGIKVDGKRLVV 176
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.1 bits (92), Expect = 4e-04
Identities = 26/76 (34%), Positives = 35/76 (46%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L V T T + L F G+V I IP D + + RGF FV F DA +D
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 323 MDGRMLDGRELXVQMA 370
M+ L G+ + V A
Sbjct: 72 MNESELFGKTIRVNFA 87
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE ++
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE ++
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
L + L++ TT E L F + G V D + RD T+ SRGF FV F AE ++
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = +2
Query: 107 YGRPPPRIDGMVS--------LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRES 262
+G PPP +G + + V ++ + L +FE+ G++ D+ + D + S
Sbjct: 181 FGGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGAS 240
Query: 263 RGFAFVRFFERRDAEXTLDTMDGRMLD-GRELXVQMA 370
RG+AFV + + DA T DG + G+ L V ++
Sbjct: 241 RGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVS 277
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 203 ERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQMA 370
E+ E+ Y DR ++ + +AF+ F ER D ++ +G+ L+G + +A
Sbjct: 391 EKLNELFKEYASLDR-VKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 119 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERR 298
PP ++ ++ +K NL Y+ T E++ +F + G V I + T E+RG AFV + +
Sbjct: 14 PPEVNRILYIK--NLPYKITTEEMYEIFGKFGAVRQIRVGN---TAETRGTAFVVYEDIF 68
Query: 299 DAEXTLDTMDGRMLDGRELXV 361
DA+ + + G + R L V
Sbjct: 69 DAKTACEHLSGYNVSNRYLVV 89
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 146 LKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRES-RGFAFVRFFERRDAEXTLDT 322
L + NL ++T EDL+ + G+ +I +P R ++ GF F++F E+ DAE +
Sbjct: 97 LIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREF 156
Query: 323 MDGRMLDGRELXVQMA 370
+ + GR + A
Sbjct: 157 FNTNKVLGRSVAADWA 172
Score = 31.5 bits (68), Expect = 0.31
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 158 NLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTM-DGR 334
NL+Y T E ++ + G++ I + + + S+G AFV F +A ++ + DG
Sbjct: 269 NLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGVEDGV 328
Query: 335 MLDGRELXVQMA 370
++D R + +A
Sbjct: 329 IIDNRLVKANLA 340
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V L T ++L +F+R G + +++ R GFAFV + + RDAE + +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 332 RMLDGRELXVQMA 370
+ G V+++
Sbjct: 62 SRICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V L T ++L +F+R G + +++ R GFAFV + + RDAE + +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 332 RMLDGRELXVQMA 370
+ G V+++
Sbjct: 62 SRICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V L T ++L +F+R G + +++ R GFAFV + + RDAE + +DG
Sbjct: 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDG 61
Query: 332 RMLDGRELXVQMA 370
+ G V+++
Sbjct: 62 SRICGVRARVELS 74
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 182 EDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAE 307
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A+
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Score = 35.9 bits (79), Expect = 0.014
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V ++ EDL F + GEV + DR SRGFAFV F + L +
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE- 91
Query: 332 RMLDGRELXVQMA 370
+ + G+ + V+ A
Sbjct: 92 QTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 182 EDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAE 307
+DLR FE+ G+V DI P D+ T+ R FAF+ F E A+
Sbjct: 124 QDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESAD 165
Score = 35.9 bits (79), Expect = 0.014
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V ++ EDL F + GEV + DR SRGFAFV F + L +
Sbjct: 33 VGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAARE- 91
Query: 332 RMLDGRELXVQMA 370
+ + G+ + V+ A
Sbjct: 92 QTIKGKSVEVKPA 104
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M + V ++++ + LRR F+ G + I + D T + FAFV + A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 317 DTMDGRMLDGRELXV 361
++M+G+ML GR L V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRF 286
DL+ VFE GE+ + R R RGF ++ F
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M + V ++++ + LRR F+ G + I + D T + FAFV + A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 317 DTMDGRMLDGRELXV 361
++M+G+ML GR L V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXV 361
DL+ VFE GE+ + R R RGF ++ F + M+ L G+ L V
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 40.3 bits (90), Expect = 7e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M + V ++++ + LRR F+ G + I + D T + FAFV + A
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 317 DTMDGRMLDGRELXV 361
++M+G+ML GR L V
Sbjct: 161 ESMNGQMLGGRNLKV 175
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXV 361
DL+ VFE GE+ + R R RGF ++ F + M+ L G+ L V
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYLRV 280
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L + + T P DL F G V D+ I D T S+G +V F++ L
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-A 84
Query: 323 MDGRMLDGRELXVQ 364
++G+ L G L +Q
Sbjct: 85 LNGQRLMGAPLQIQ 98
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 122 PRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRD 301
P G + V+NL + + +R +FE G + I + D RE+RGFA + F D
Sbjct: 121 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 179
Query: 302 AEXTLDTMDGRMLDGR 349
A+ + + ++ L GR
Sbjct: 180 AQKSCEQLNNFELAGR 195
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
+L + + T P DL F G V D+ I D T S+G +V F++ L
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-A 229
Query: 323 MDGRMLDGRELXVQ 364
++G+ L G L +Q
Sbjct: 230 LNGQRLMGAPLQIQ 243
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 122 PRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRD 301
P G + V+NL + + +R +FE G + I + D RE+RGFA + F D
Sbjct: 266 PGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDS-NRENRGFATITFRNADD 324
Query: 302 AEXTLDTMDGRMLDGR 349
A+ + + ++ L GR
Sbjct: 325 AQKSCEQLNNFELAGR 340
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERR 298
P + + L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 299 DAEXTLDTM-DGRMLDGRELXVQM 367
A T+ D + L G +Q+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQV 105
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
+L ++F G + + DR T +S+ F FV + ++ + M+G + + L VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 365 M 367
+
Sbjct: 504 L 504
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERR 298
P + + L V + +DLR +FE+ G++ + I +D+YT +G AF+ + R
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 299 DAEXTLDTM-DGRMLDGRELXVQM 367
A T+ D + L G +Q+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQV 105
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
+L ++F G + + DR T +S+ F FV + ++ + M+G + + L VQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 365 M 367
+
Sbjct: 504 L 504
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 188 LRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQM 367
+R + + GE+ DI + RD T+ SRGF FV F + + + + ++DG+ + +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP-HIIDGKTVDPKR 59
Query: 368 A 370
A
Sbjct: 60 A 60
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 188 LRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQM 367
+R + + GE+ DI + RD T+ SRGF FV F + + + + ++DG+ + +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRP-HIIDGKTVDPKR 59
Query: 368 A 370
A
Sbjct: 60 A 60
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE + ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 332 RMLDGREL 355
+ L G +
Sbjct: 59 KELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE + ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 332 RMLDGREL 355
+ L G +
Sbjct: 59 KELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
+ LT R + +D+ F G++ D+ + GF FV F ++RDAE + ++G
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNG 58
Query: 332 RMLDGREL 355
+ L G +
Sbjct: 59 KELGGERV 66
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
++ V L + + L + + G V + +P+DR T +GF FV F DA+ +
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 323 MDGRMLDGRELXVQMA 370
++ L G+ + V A
Sbjct: 74 LNMIKLYGKPIKVNKA 89
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 128 IDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDI-YIPRDRYTRESRGFAFVRFFERRDA 304
+D ++ V NL + L F G + + I RD + S+GFAF+ F +
Sbjct: 96 MDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 155
Query: 305 EXTLDTMDGRMLDGRELXVQMA 370
+ L+ M+G+ L R + V A
Sbjct: 156 DTALEAMNGQFLCNRAITVSYA 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = +2
Query: 143 SLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDT 322
++ V L + + L + + G V + +P+DR T +GF FV F DA+ +
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 323 MDGRMLDGRELXVQMA 370
++ L G+ + V A
Sbjct: 84 LNMIKLYGKPIKVNKA 99
Score = 32.7 bits (71), Expect = 0.13
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 128 IDGMVSLKVDNLTYRTTPEDLRRVFERXGEVGDI-YIPRDRYTRESRGFAFVRFFERRDA 304
+D ++ V NL + L F G + + I RD + S+GFAF+ F +
Sbjct: 106 MDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEAS 165
Query: 305 EXTLDTMDGRMLDGRELXVQMA 370
+ L+ M+G+ L R + V A
Sbjct: 166 DTALEAMNGQFLCNRAITVSYA 187
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.005
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLD 319
V+L V NL + L++ FE G + + D R S+GF FV F + +A +
Sbjct: 254 VNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGR-SKGFGFVCFEKPEEATSAVT 312
Query: 320 TMDGRMLDGRELXVQMA 370
M+ +M+ + L V +A
Sbjct: 313 EMNSKMVCSKPLYVAIA 329
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N E L ++F + G + + +S+GF FV F +AE + +
Sbjct: 154 VKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHD 211
Query: 332 RMLDGRELXVQM 367
++G +L + +
Sbjct: 212 STIEGTDLKLHV 223
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V NL +++ +F + G + + I R FAFV F + RDAE + DG
Sbjct: 13 VGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRARDG 68
Query: 332 RMLDGRELXVQ 364
DGR + V+
Sbjct: 69 YEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V NL +++ +F + G + + I R FAFV F + RDAE + DG
Sbjct: 13 VGNLPGDVREKEVEDIFHKYGRIKYVDIKSGR----GPAFAFVEFEDHRDAEDAVRARDG 68
Query: 332 RMLDGRELXVQ 364
DGR + V+
Sbjct: 69 YEFDGRRIRVE 79
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 36.7 bits (81), Expect = 0.008
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 317 DTMDGRMLDG--RELXVQMA 370
+DG+ ++G L V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 36.7 bits (81), Expect = 0.008
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 317 DTMDGRMLDG--RELXVQMA 370
+DG+ ++G L V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 36.7 bits (81), Expect = 0.008
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
M L + + Y D+ R + G++ +I + +Y GFAFV F + RDAE
Sbjct: 1 MPRLYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDAC 52
Query: 317 DTMDGRMLDG--RELXVQMA 370
+DG+ ++G L V+MA
Sbjct: 53 HDLDGKTMEGSSMRLVVEMA 72
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 34.7 bits (76), Expect = 0.033
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +2
Query: 137 MVSLKVDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
MV + + L R + D+ F G++ D+ + GF FV F ++RDA+ +
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV 52
Query: 317 DTMDGRMLDGRELXVQ 364
++G+ L G + ++
Sbjct: 53 HDLNGKELCGERVILE 68
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 33.9 bits (74), Expect = 0.058
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 140 VSLKVDNLTYRTTPEDLRRVFE-RXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTL 316
+++ V NL + T + L F + G V + I RD+ T + +GFAFV F + L
Sbjct: 246 MAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
Query: 317 DTMDGRMLDGRELXV 361
+M+ ++ R+L +
Sbjct: 306 -SMETIKMEKRDLRI 319
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 197 VFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQMA 370
+FE+ G V D+ I + R S+GF FV DA+ +G ++GR + V +A
Sbjct: 1 MFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.9 bits (69), Expect = 0.23
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +2
Query: 152 VDNLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDG 331
V N+ ++ T ++L+ +F + G V + + + +G AFV F A+ + + D
Sbjct: 687 VRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDK 745
Query: 332 RMLDGRELXVQMA 370
ML REL V ++
Sbjct: 746 LMLRERELEVALS 758
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 158 NLTYRTTPEDLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRM 337
+L + E L + F + + R+ T +S+G+ FV F + D + MDG+
Sbjct: 209 DLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKY 268
Query: 338 LDGRELXVQ 364
+ R + ++
Sbjct: 269 VGNRPIKLR 277
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 185 DLRRVFERXGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQ 364
DL F G + + D+ T S+ F FV + + A + M+G + + L VQ
Sbjct: 350 DLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQ 409
Query: 365 M 367
+
Sbjct: 410 L 410
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 224 DIYIPRDRYTRESRGFAFVRFFERRDAEXTLDTMDGRMLDGRELXVQMA 370
DI++ DR + +GFA+V F + + ++G R L V A
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Frame = +2
Query: 131 DGMVSLKVDNLTYRTTPEDLRRVFERXGEVG-DIYI--PRDRYTRES----RGFAFVRFF 289
D + ++ V NL T E+ ++ + G + DI P+ + RE +G +
Sbjct: 176 DKVHAVYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYI 235
Query: 290 ERRDAEXTLDTMDGRMLDGRELXVQMA 370
++ E + +DG L+GRE+ V+ A
Sbjct: 236 KKESVELACNILDGANLNGREVKVEEA 262
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 26.6 bits (56), Expect = 8.8
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = -1
Query: 461 CASNYDGGNETWTCACD---RNDSCMAMRGDHIA-PSEREVPCRPTFVRPXC 318
CAS DG +TC CD +C M I P C+P F C
Sbjct: 388 CASTIDGITTNYTCTCDDGWTGTNCDTMIDFCIPNPCSYNSTCKPKFKGYDC 439
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,101,297
Number of Sequences: 27780
Number of extensions: 169444
Number of successful extensions: 548
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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