Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32307
         (417 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109202-1|AAI09203.1|  524|Homo sapiens jerky homolog-like (mou...    29   8.2  
AF004715-1|AAB65833.1|  442|Homo sapiens jerky gene product homo...    29   8.2  

>BC109202-1|AAI09203.1|  524|Homo sapiens jerky homolog-like (mouse)
           protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -2

Query: 215 WVYEFIKRHSDLALKQATPTSIARAIGFNQVQVNRFYTNLKKCQEKYNFPSGRIYNMDET 36
           W+  F +RHS   +++    +    +  ++  V  F  N +   E+ N    +IYN DET
Sbjct: 125 WLTRFKQRHS---IREINIRN--ERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADET 179

Query: 35  GI 30
           G+
Sbjct: 180 GL 181


>AF004715-1|AAB65833.1|  442|Homo sapiens jerky gene product homolog
           protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = -2

Query: 215 WVYEFIKRHSDLALKQATPTSIARAIGFNQVQVNRFYTNLKKCQEKYNFPSGRIYNMDET 36
           W+  F +RHS   +++    +    +  ++  V  F  N +   E+ N    +IYN DET
Sbjct: 43  WLTRFKQRHS---IREINIRN--ERLNGDETAVEDFCNNFRDFIERENLQPEQIYNADET 97

Query: 35  GI 30
           G+
Sbjct: 98  GL 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,413,242
Number of Sequences: 237096
Number of extensions: 826067
Number of successful extensions: 1033
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)