Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32304
         (622 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase ...   168   1e-41
AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase ...   168   1e-41
AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open readi...   167   3e-41
AL035689-5|CAI42391.1|  169|Homo sapiens chromosome 6 open readi...   125   1e-28
BC008196-1|AAH08196.1|  255|Homo sapiens phosphoglycerate mutase...    32   1.9  

>BC056878-1|AAH56878.1|  463|Homo sapiens tRNA methyltransferase 11
           homolog (S. cerevisiae) protein.
          Length = 463

 Score =  168 bits (409), Expect = 1e-41
 Identities = 80/170 (47%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   YMMLHGRTRPTRVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMI 182
           Y  +HG  + TR  QK R  +E+I+ NL+QYG E  Y+D+LVSD S P WR G  FDA+I
Sbjct: 247 YNTVHGLGKATRKNQKWRGPDENIRANLRQYGLEKYYLDVLVSDASKPSWRKGTYFDAII 306

Query: 183 TDPPYGVREPTEKIGIER---NNYTLSEEHLTNHIPSKVEYGLPHIYSDLLNFAARHLEM 353
           TDPPYG+RE T + G ++         E+   +H+P  + Y L  ++ DLLNFAA  L +
Sbjct: 307 TDPPYGIRESTRRTGSQKEIPKGIEKWEKCPESHVPVSLSYHLSDMFLDLLNFAAETLVL 366

Query: 354 NGRLVCWFPVIMADYQDEQLPSHPCLRLIANSEQILTKLTARRLLTYEKI 503
            GRLV W PV   +Y +E +P HPCL L++N EQ L+  T+RRL+T EK+
Sbjct: 367 GGRLVYWLPVYTPEYTEEMVPWHPCLELVSNCEQKLSSHTSRRLITMEKV 416


>AF532977-1|AAQ10284.1|  463|Homo sapiens putative RNA methylase
           protein.
          Length = 463

 Score =  168 bits (409), Expect = 1e-41
 Identities = 80/170 (47%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   YMMLHGRTRPTRVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMI 182
           Y  +HG  + TR  QK R  +E+I+ NL+QYG E  Y+D+LVSD S P WR G  FDA+I
Sbjct: 247 YNTVHGLGKATRKNQKWRGPDENIRANLRQYGLEKYYLDVLVSDASKPSWRKGTYFDAII 306

Query: 183 TDPPYGVREPTEKIGIER---NNYTLSEEHLTNHIPSKVEYGLPHIYSDLLNFAARHLEM 353
           TDPPYG+RE T + G ++         E+   +H+P  + Y L  ++ DLLNFAA  L +
Sbjct: 307 TDPPYGIRESTRRTGSQKEIPKGIEKWEKCPESHVPVSLSYHLSDMFLDLLNFAAETLVL 366

Query: 354 NGRLVCWFPVIMADYQDEQLPSHPCLRLIANSEQILTKLTARRLLTYEKI 503
            GRLV W PV   +Y +E +P HPCL L++N EQ L+  T+RRL+T EK+
Sbjct: 367 GGRLVYWLPVYTPEYTEEMVPWHPCLELVSNCEQKLSSHTSRRLITMEKV 416


>AL035689-8|CAI42394.1|  458|Homo sapiens chromosome 6 open reading
           frame 75 protein.
          Length = 458

 Score =  167 bits (406), Expect = 3e-41
 Identities = 80/169 (47%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3   YMMLHGRTRPTRVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMI 182
           Y  +HG  + TR  QK R  +E+I+ NL+QYG E  Y+D+LVSD S P WR G  FDA+I
Sbjct: 247 YNTVHGLGKATRKNQKWRGPDENIRANLRQYGLEKYYLDVLVSDASKPSWRKGTYFDAII 306

Query: 183 TDPPYGVREPTEKIGIER---NNYTLSEEHLTNHIPSKVEYGLPHIYSDLLNFAARHLEM 353
           TDPPYG+RE T + G ++         E+   +H+P  + Y L  ++ DLLNFAA  L +
Sbjct: 307 TDPPYGIRESTRRTGSQKEIPKGIEKWEKCPESHVPVSLSYHLSDMFLDLLNFAAETLVL 366

Query: 354 NGRLVCWFPVIMADYQDEQLPSHPCLRLIANSEQILTKLTARRLLTYEK 500
            GRLV W PV   +Y +E +P HPCL L++N EQ L+  T+RRL+T EK
Sbjct: 367 GGRLVYWLPVYTPEYTEEMVPWHPCLELVSNCEQKLSSHTSRRLITMEK 415


>AL035689-5|CAI42391.1|  169|Homo sapiens chromosome 6 open reading
           frame 75 protein.
          Length = 169

 Score =  125 bits (301), Expect = 1e-28
 Identities = 59/124 (47%), Positives = 79/124 (63%)
 Frame = +3

Query: 3   YMMLHGRTRPTRVGQKVRSKEESIKNNLKQYGTESKYIDILVSDFSLPLWRDGVKFDAMI 182
           Y  +HG  + TR  QK R  +E+I+ NL+QYG E  Y+D+LVSD S P WR G  FDA+I
Sbjct: 45  YNTVHGLGKATRKNQKWRGPDENIRANLRQYGLEKYYLDVLVSDASKPSWRKGTYFDAII 104

Query: 183 TDPPYGVREPTEKIGIERNNYTLSEEHLTNHIPSKVEYGLPHIYSDLLNFAARHLEMNGR 362
           TDPPYG+RE T + G ++      E+   +H+P  + Y L  ++ DLLNFAA  L + GR
Sbjct: 105 TDPPYGIRESTRRTGSQKEIPKGIEKCPESHVPVSLSYHLSDMFLDLLNFAAETLVLGGR 164

Query: 363 LVCW 374
           LV W
Sbjct: 165 LVYW 168


>BC008196-1|AAH08196.1|  255|Homo sapiens phosphoglycerate mutase
           family member 5 protein.
          Length = 255

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = +3

Query: 144 PLWRDGVKFDAMITDPPYGVREPTEKIGIERNNYTLSEEHLTNHIPSKVEYGLPHIYSDL 323
           P W  G +    + DP +  REP   I + + N    EE L + +         HI+  L
Sbjct: 45  PAWAGGARPGPGVWDPNWDRREPLSLINVRKRNVESGEEELASKLDHYKAKATRHIF--L 102

Query: 324 LNFAARHLE 350
           +  +  H++
Sbjct: 103 IRHSQYHVD 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,331,029
Number of Sequences: 237096
Number of extensions: 1934453
Number of successful extensions: 3916
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3910
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)