Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32294
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 30 0.34
AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical ... 28 1.4
Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 28 1.8
AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 28 1.8
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 27 2.4
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 27 2.4
Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 4.2
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 4.2
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 4.2
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 4.2
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 26 5.5
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 26 7.3
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 30.3 bits (65), Expect = 0.34
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 315 TLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 175
TL + L ++A LPS +T S + + G+T + R++V + D
Sbjct: 327 TLAESLGGYESLAELPSIMTHASVPAETRIVLGITDNLIRISVGIED 373
>AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical
protein Y57A10B.6 protein.
Length = 370
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -1
Query: 306 DELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSDF 172
D +VSV T+ +L T S TDL F++ S RL +LV DF
Sbjct: 95 DGIVSVHTLKLL----TAVSFFTDLDFVKCSFSILSRLDLLVEDF 135
>Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 69 HHHHGMLQHQNLTHRLRPT 125
HHHHG H + + +RPT
Sbjct: 317 HHHHGTHHHHHYSSTVRPT 335
>AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical
protein T11F9.12 protein.
Length = 688
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 69 HHHHGMLQHQNLTHRLRPT 125
HHHHG H + + +RPT
Sbjct: 317 HHHHGTHHHHHYSSTVRPT 335
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 140 SETALPASDAEKSETNTVSLWNDDVTPSKN 229
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 140 SETALPASDAEKSETNTVSLWNDDVTPSKN 229
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 140 SETALPASDAEKSETNTVSLWNDDVTPSKN 229
S T LP AE ++ + S W + +PS N
Sbjct: 117 SATGLPTVPAEPNKARSSSYWKTEASPSNN 146
>Z94800-1|CAB08161.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 164 DAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
D +TN +S++ND VTP + + +S T
Sbjct: 296 DFSMPDTNVISVYNDYVTPLHKLADYTSSISKT 328
>Z82288-9|CAB05328.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 164 DAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
D +TN +S++ND VTP + + +S T
Sbjct: 296 DFSMPDTNVISVYNDYVTPLHKLADYTSSISKT 328
>Z73104-9|CAA97438.2| 491|Caenorhabditis elegans Hypothetical
protein K08D8.6 protein.
Length = 491
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 164 DAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
D +TN +S++ND VTP + + +S T
Sbjct: 296 DFSMPDTNVISVYNDYVTPLHKLADYTSSISKT 328
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -1
Query: 315 TLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 175
TL + L ++A LPS +T S + G+T + R++V + D
Sbjct: 327 TLAESLGGCESLAELPSIMTHASVPSATRAELGITDNLIRISVGIED 373
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 832 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 879
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 727 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 774
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 724 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 771
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 832 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 879
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 727 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 774
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 724 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 771
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 119 ADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVT 262
A + + S T+ D + S T TVSL N + S NV+ + +S++
Sbjct: 724 ASEEKDLSSTSDDLKDGDVSTTATVSLINSPNSNSANVRRKSQGLSIS 771
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 161 SDAEKSETNTVSLWNDDVTPSKNVK 235
SD+E + TN +LWN + P N K
Sbjct: 193 SDSETTPTNLQTLWNVKLRPGSNRK 217
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = -1
Query: 330 TVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQRLTVLVSD 175
T P T S +T S TS +TD T E T S T +D
Sbjct: 176 TDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTD 227
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 116 KADVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADV 253
+A+ D++++ TAL SD E ++ VS +DD + + S + +
Sbjct: 1149 EAEDDTKSTTTALEPSDIEDNDLELVSDLSDDNSSISMISSTSTAI 1194
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 122 DVDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSV 241
DV SE +T +AE N+ S WNDD +KN +
Sbjct: 1582 DVQSELEDTKQKLVEAE----NSASGWNDDDAWNKNENEI 1617
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,644,601
Number of Sequences: 27780
Number of extensions: 80353
Number of successful extensions: 286
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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