Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32292
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 39 8e-04
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 37 0.002
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 33 0.029
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 32 0.067
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 31 0.20
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.82
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 27 1.9
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 2.5
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 2.5
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 2.5
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 3.3
SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit Cpp... 27 3.3
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 26 4.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.8
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 5.8
SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces p... 26 5.8
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 38.7 bits (86), Expect = 8e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 364 NPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTD-LVMVLTTAQWMT 540
+PE+ ++ TSGSTGLPK V+L+++ +VA + T+ H T D L+ L A +
Sbjct: 237 SPEEICCIMYTSGSTGLPKGVILSHKNMVA-IVTAIVKHVPEVTSKDYLLAYLPLAHILE 295
Query: 541 FTMK 552
F +
Sbjct: 296 FAFE 299
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 367 PEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVMV 516
P+D +L+L TSG+TG PK V LT++ + + T + P T V++
Sbjct: 160 PDDVMLVLHTSGTTGRPKVVPLTHKNLCRSIHNITTSYRLDPRDTSYVVM 209
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 33.5 bits (73), Expect = 0.029
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 364 NPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMT 540
NPE + LL TSGSTG PK V+ G + + Y PTD + W+T
Sbjct: 263 NPEHPLFLLYTSGSTGKPKGVVHCTGGYLLGAAATCKYVFDL-HPTDRMGCAGDVGWIT 320
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 32.3 bits (70), Expect = 0.067
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 370 EDTILLLPTSGSTGLPKAVLLTNRGIVAHL 459
+D + TSGSTG PK V+L +R I+A L
Sbjct: 245 DDICCYMYTSGSTGKPKGVVLLHRNIIAAL 274
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 30.7 bits (66), Expect = 0.20
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 55 NNIMVVMRNHQN-LFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYN 231
N ++ +M +H LF ++L SG +D T + + + ++ S E+ N
Sbjct: 264 NEVVPIMVSHSPALFVGILAILYSGNAYCPIDVETRTERVHFISKDVDASFAIVSEEFVN 323
Query: 232 DIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTG 411
++ LK Y NE +E ++ ++I F PE + + +L TSGSTG
Sbjct: 324 RFP---NNTIILKVPEY--NES--MEIKVD---DEIPPFPFPE-SLDSVAYVLYTSGSTG 372
Query: 412 LPKAVLLTNR 441
PK V +++R
Sbjct: 373 NPKGVAISHR 382
Score = 30.3 bits (65), Expect = 0.27
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 325 HSNDIDSFRIPEGNPEDTILLLPTSGSTGLPKAVLLTNRGIV 450
+SN+I++ + + +L TSGSTG PK LT+ +V
Sbjct: 2855 YSNNIENPYTKDFEDSNLAYVLYTSGSTGKPKGCCLTHHNVV 2896
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 28.7 bits (61), Expect = 0.82
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 82 HQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDL 258
H N+ S L G LP +D T V +LSY LL+ + Y+D+ K++ +L
Sbjct: 167 HVNILSKADLLCTYGTLPMKLDFFTEVQDLSYLAPLLDRDKRL---QRYSDLNKAICEL 222
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.5 bits (58), Expect = 1.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 334 DIDSFRIPEGNPEDTILLLPTSGSTGLPKAV--LLTNRGIVAHLPT-SWTYHTKFPTPTD 504
DID+ I G + L+ +SGSTG+PK++ L+ + T + H P
Sbjct: 148 DIDAPCIRAGLEPEVALINHSSGSTGVPKSMPFLMKKYALGYDYGTPEFMNHLSTPMVMA 207
Query: 505 LVMVLTTAQWM 537
LTT W+
Sbjct: 208 TSFALTTLSWI 218
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 244 SLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGS 405
S+D PDL+ + I +D L F+ S D+ R +G+PE++ +L T S
Sbjct: 1722 SVDGFPDLQVSSDINVRNDRLSSFVMS-SEDL---RSSDGHPENSDSVLETISS 1771
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 385 LLPTSGSTGLPKAVLLTNRGIVAHLPTSW 471
L P +GS LPKA+L + H P W
Sbjct: 51 LYPLTGSDALPKALLPIGNKPMLHYPLYW 79
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/48 (25%), Positives = 29/48 (60%)
Frame = +3
Query: 459 TYVLDVSHEVSYAN*SGDGIDDSAMDDVYHENHDMRRLPHTNSSNSQE 602
+++LD + + AN S +DDS ++ Y+E +M++ +++++E
Sbjct: 282 SFILDSNGAIEVAN-SAFALDDSDLESAYNEELEMKKDTSKPTASTKE 328
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 VYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYIC-NEDDLLEDFIN--GHS 330
V+ L +F + PSI+FC ++ + + P K + N +D E F N +
Sbjct: 4 VFALGHFCEAEGPSIIFCTQKLHRSTVSKFFEHPTSKRSIGVTENGNDSPEAFKNELDNR 63
Query: 331 NDIDS 345
N+ DS
Sbjct: 64 NNADS 68
>SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit
Cpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 26.6 bits (56), Expect = 3.3
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Frame = +1
Query: 100 IYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFC-----DREYYNDIKKSLDDLPD 264
+YW L S A+ +D S +S QL PS FC D + L
Sbjct: 60 VYWELS-SLAILGKLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLC 118
Query: 265 LKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPED 375
T+AY E D L D++ N SFR+ D
Sbjct: 119 DSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESD 155
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 522 DSAMDDVYHENHDMRRLPHTNSSNSQ 599
DS + + ENHD+ R P+ S SQ
Sbjct: 310 DSTLMLTFIENHDLYRFPYYTSDQSQ 335
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.8
Identities = 30/114 (26%), Positives = 46/114 (40%)
Frame = -2
Query: 452 ATIPLFVKSTALGSPVDPLVGSNNIVSSGFPSGILKLSMSLLCPFIKSSRRSSSLQM*AS 273
+TI S++ + + S++ SS F S + SMS F S SSS S
Sbjct: 288 STISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSST---IS 344
Query: 272 VLRSGKSSKDFFMSL*YSRSQNTILGSSN*RK*LSS*TVVLGSIMKGKAPLSSS 111
S SS F + S+S ++ + + SS T+ S + SSS
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSS 398
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 5.8
Identities = 25/84 (29%), Positives = 32/84 (38%)
Frame = +1
Query: 361 GNPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMT 540
G T+ + PT STG V+ T + A T T + T T+ V T T
Sbjct: 850 GTETSTVTVTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGY-TGTETSTVTVTP---T 905
Query: 541 FTMKITTCAVYHIPILVTPKKRTI 612
T TT V P VT + I
Sbjct: 906 GTSTGTTTVVIQTPTTVTATETDI 929
Score = 25.8 bits (54), Expect = 5.8
Identities = 25/84 (29%), Positives = 32/84 (38%)
Frame = +1
Query: 361 GNPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMT 540
G T+ + PT STG V+ T + A T T + T T+ V T T
Sbjct: 938 GTETSTVTVTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGY-TGTETSTVTVTP---T 993
Query: 541 FTMKITTCAVYHIPILVTPKKRTI 612
T TT V P VT + I
Sbjct: 994 GTSTGTTTVVIQTPTTVTATETDI 1017
Score = 25.8 bits (54), Expect = 5.8
Identities = 25/84 (29%), Positives = 32/84 (38%)
Frame = +1
Query: 361 GNPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMT 540
G T+ + PT STG V+ T + A T T + T T+ V T T
Sbjct: 1026 GTETSTVTVTPTGTSTGTTTVVIQTPTTVTATETDIVTVTTGY-TGTETSTVTVTP---T 1081
Query: 541 FTMKITTCAVYHIPILVTPKKRTI 612
T TT V P VT + I
Sbjct: 1082 GTSTGTTTVVIQTPTTVTATETDI 1105
>SPAC2E1P3.01 |||zinc binding dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 503 SVGVGNFV*YVQDVGR*ATIPLFVKSTALGSPVDPLVGSN 384
+VG +FV V+DVG ++ +T G PL GSN
Sbjct: 54 TVGGTDFVAVVEDVGEGVDRSKYIGATVSGWAPGPLDGSN 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,925,410
Number of Sequences: 5004
Number of extensions: 63654
Number of successful extensions: 197
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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