Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32292
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical ... 38 0.005
U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical pr... 36 0.027
AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical ... 35 0.062
Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 33 0.19
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 32 0.44
U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical p... 31 0.76
U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa ... 31 1.0
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 30 1.3
AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical... 30 1.3
AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical ... 30 1.3
AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical ... 30 1.3
U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine rece... 29 2.3
U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 29 4.1
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 28 5.4
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 28 5.4
AL132952-13|CAB61154.2| 283|Caenorhabditis elegans Hypothetical... 28 5.4
Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 28 7.1
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 27 9.4
U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical pr... 27 9.4
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical ... 27 9.4
>U97550-5|AAK18982.2| 497|Caenorhabditis elegans Hypothetical
protein T20F7.7 protein.
Length = 497
Score = 43.6 bits (98), Expect = 1e-04
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Frame = +1
Query: 52 GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSIVFCDRE--- 222
G+ I+V + N ++ S GA+ + +T E+ Y L+ +VF + +
Sbjct: 58 GDTILVCLPNSIWYPLLFLSCAKIGAVLSGISHESTAGEIKYSLKQSGAKLVFTNEKVSK 117
Query: 223 --YYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLP- 393
Y+ + S++ LPD + YI D I GH + FR PE D+ILL P
Sbjct: 118 ENYWALSENSVEVLPD-SVKTYI--------DRITGH----EDFR-PENLDIDSILLAPF 163
Query: 394 TSGSTGLPKAVLLTNRGIVA 453
+SG+TG PK LLT+R +A
Sbjct: 164 SSGTTGAPKCCLLTHRNFLA 183
>AL032658-2|CAA21744.1| 687|Caenorhabditis elegans Hypothetical
protein Y76A2B.3 protein.
Length = 687
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Frame = +1
Query: 172 SYFLQLLEPSIVFCDR-EYYNDIKKSLDDLPDLKTEAYICNEDDLLE-----DFINGHS- 330
++ + E S+V D + + K+ +++P LK I + D+L + D I S
Sbjct: 172 TFIISQAEISVVIVDSFKKAESLIKNRENMPTLKNIIVIDSADELKDGTAIIDTIRVESL 231
Query: 331 -NDID-SFRIPEGN----PEDTILLLPTSGSTGLPKAVLLTNRGIVAHL 459
N ++ R P N P+D ++ TSG+TG PK V+LT+ IVA++
Sbjct: 232 TNALNLGSRYPFTNNLPKPDDNYIICYTSGTTGTPKGVMLTHSNIVANI 280
>U23521-8|AAC46810.4| 505|Caenorhabditis elegans Hypothetical
protein F41C3.3 protein.
Length = 505
Score = 37.1 bits (82), Expect = 0.012
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 52 GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSI-VFCDREYY 228
G+ +M + + ++Y + L GAL ++P T E +++++ PSI V C+ E
Sbjct: 72 GDRVMARVSKTTDTAALYIACLQIGALYIPVNPGYTESEAAHYIKDATPSILVSCNEE-- 129
Query: 229 NDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGST 408
LD + + + + NED L + G N E + D + TSG+T
Sbjct: 130 ------LDKV--FRDKIRVINEDKLASEA--GSLNACTMIEHVEKS--DPASVCYTSGTT 177
Query: 409 GLPKAVLLTN 438
GLPK +LT+
Sbjct: 178 GLPKGAILTH 187
>Z35595-8|CAA84640.1| 540|Caenorhabditis elegans Hypothetical
protein C01G6.7 protein.
Length = 540
Score = 35.9 bits (79), Expect = 0.027
Identities = 31/158 (19%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Frame = +1
Query: 4 KRAVSIARSIMARG-AAGNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYF 180
K+ + I+ + G G+ ++ N+ F+ +G + T +E++Y
Sbjct: 53 KKVLQISEWFVENGYKKGDVFLLASYNNWRCFAAALGAWRAGLIVSAAASQFTSFEMNYQ 112
Query: 181 LQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYI-CNEDDLLEDFINGHSNDIDSFRIP 357
++ + ++ D+ ++++ +L +K I N + F S + + ++P
Sbjct: 113 IEDSQSQVILVDKHTLPVVQEACKNLKFVKQIISISANPPSPVIKFDVLTSRLVRNLKMP 172
Query: 358 EGNPEDTILLLP-TSGSTGLPKAVLLTNRGIVAHLPTS 468
+P++ I+ LP +SG+TG PK V++++ L +S
Sbjct: 173 LIDPKNDIVFLPYSSGTTGKPKGVMISHLNFSMMLESS 210
>AC024845-5|AAF60848.1| 719|Caenorhabditis elegans Hypothetical
protein Y65B4BL.5 protein.
Length = 719
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +1
Query: 367 PEDTILLLPTSGSTGLPKAVLLTNRGIVA 453
PED + TSG+TG PK V+LT+ ++A
Sbjct: 290 PEDLATICYTSGTTGTPKGVMLTHANVIA 318
>Z81027-1|CAB02686.1| 566|Caenorhabditis elegans Hypothetical
protein AH10.1 protein.
Length = 566
Score = 33.1 bits (72), Expect = 0.19
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +1
Query: 157 TVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNED-DLLEDFINGHSN 333
T YEL + SIVF D + +++S+ P ++ IC L +F +
Sbjct: 107 TDYELQLQFKDSNTSIVFTDEDRLARVRRSVAKCPGVRK--IICLRTFPLRAEFPENVLD 164
Query: 334 DIDSFRIPEGN-----PEDTILLLP-TSGSTGLPKAVLLTNRGIVAHL 459
++ + P+ D I LLP +SG+TG PK LT++ I A L
Sbjct: 165 FVELTQTPDQPINVVVSPDAIALLPYSSGTTGRPKGCQLTHKNISAML 212
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +1
Query: 367 PEDTILLLPTSGSTGLPKAVLLTNRGIVAHLP---TSWT--YHTKF 489
PE T ++ TSG+TG PK V +++ +V + TSWT Y KF
Sbjct: 215 PETTYVICHTSGTTGRPKGVEMSHGSLVTSVSGIFTSWTIAYKWKF 260
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 373 DTILLLPTSGSTGLPKAVLLTNRGIVAHL 459
D L++ TSG+TG PK V+L ++ +VA L
Sbjct: 289 DIALIMYTSGTTGQPKGVILLHQNVVAAL 317
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 370 EDTILLLPTSGSTGLPKAVLLTNRGIV--AHLPTSWTY 477
ED + +L TSGSTG PK + T G + A+ T +T+
Sbjct: 277 EDPLFILYTSGSTGKPKGIQHTTAGYMTYAYATTKYTF 314
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 370 EDTILLLPTSGSTGLPKAVLLTNRGIV--AHLPTSWTY 477
ED + +L TSGSTG PK + T G + A+ T +T+
Sbjct: 287 EDPLFILYTSGSTGKPKGIQHTTAGYMTYAYATTKYTF 324
>U58758-13|AAB93427.1| 565|Caenorhabditis elegans Hypothetical
protein ZK1127.2 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.76
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Frame = +1
Query: 157 TVYELSYFLQLLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNED-DLLEDFINGHSN 333
T YEL SIVF D + I+++ P ++ IC L +F +
Sbjct: 107 TDYELQLQFCDSNTSIVFTDEDRLARIRRATAKCPGVRK--IICLRTFPLRTEFPENVLD 164
Query: 334 DIDSFRIPE-----GNPEDTILLLP-TSGSTGLPKAVLLTNRGIVAHL 459
++ + P+ D+I LLP +SG+TG PK LT+R I A L
Sbjct: 165 YVELTQTPDQPINVNVSMDSIALLPYSSGTTGRPKGCQLTHRNIGAML 212
>U39655-3|AAA80409.2| 718|Caenorhabditis elegans Fatty acid coa
synthetase familyprotein 17 protein.
Length = 718
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 370 EDTILLLPTSGSTGLPKAVLLTNRGIVA 453
+D ++ TSG+TG PK V+++++ IVA
Sbjct: 282 DDLAFIMYTSGTTGNPKGVMISHQNIVA 309
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +1
Query: 352 IPEGNPEDTILLLPTSGSTGLPKAVLLTNRGIVAHL 459
I + + ++ +L+L TSG+TGL KA L++R ++ ++
Sbjct: 232 IQQVSGQNPLLILFTSGTTGLAKAAELSHRSLIINI 267
>AF125955-10|AAV58866.1| 578|Caenorhabditis elegans Hypothetical
protein F46E10.1c protein.
Length = 578
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 358 EGNPEDTILLLPTSGSTGLPKAVLLTNRGIV 450
E P+D++ + TSG+TG PK LT+ ++
Sbjct: 204 ETQPDDSLNIQYTSGTTGQPKGATLTHHNVL 234
>AF125955-9|AAV58865.1| 597|Caenorhabditis elegans Hypothetical
protein F46E10.1b protein.
Length = 597
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 358 EGNPEDTILLLPTSGSTGLPKAVLLTNRGIV 450
E P+D++ + TSG+TG PK LT+ ++
Sbjct: 223 ETQPDDSLNIQYTSGTTGQPKGATLTHHNVL 253
>AF125955-8|AAD14712.1| 623|Caenorhabditis elegans Hypothetical
protein F46E10.1a protein.
Length = 623
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 358 EGNPEDTILLLPTSGSTGLPKAVLLTNRGIV 450
E P+D++ + TSG+TG PK LT+ ++
Sbjct: 249 ETQPDDSLNIQYTSGTTGQPKGATLTHHNVL 279
>U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 5 protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 VAHLPTSW-TYHTKFPTPTDLVMVLTTAQWMTFTMKITTCAVYHIPILVTPKKRTIEHVI 624
V++ P W T T F + LV V T W+ + I+ C Y++ I P KR +E ++
Sbjct: 73 VSYGPCQWLTDRTCFNLYSVLVHVYTHTIWL---LLISFCYRYYVMIRSEPSKRQVELLL 129
Query: 625 EII 633
II
Sbjct: 130 LII 132
>U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical
protein T26A5.4 protein.
Length = 487
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 349 RIPEGNPEDTILLLPTSGSTGLPKAVLLTNRGIVAHLPTSWTYHTKFPTPTDLVM 513
RI +G ED+ +L S S G+ + LLT R IV TSWT +F D ++
Sbjct: 236 RILQGKDEDSTILTHKS-SNGVVQ--LLTTRPIVFLSSTSWTPDERFEILLDALV 287
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.1
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +1
Query: 52 GNNIMVVMRNHQNLFSIYWSLLLSGALPFMMDPSTTVYELSYFLQLLEPSI-VFC--DRE 222
G+ +M + + ++Y + L GAL ++P+ T E +++++ +PS+ + C D +
Sbjct: 73 GDRVMARVSKTTDTAALYAACLQIGALYVPVNPALTQSEAAHYVKDAKPSLWITCKDDAD 132
Query: 223 YYNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSNDIDSFRIPEGNPEDTILLLPTSG 402
++ L + + + NE L ++ G E + TI TSG
Sbjct: 133 QIAMFQRVLKTV-CIDNPVEVINEKVLADE--AGKRKACTMIEHVEKSNAATICF--TSG 187
Query: 403 STGLPKAVLLTN 438
+TG PK +L++
Sbjct: 188 TTGAPKGAVLSH 199
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.4
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +1
Query: 250 DDLPDLKTEAYICNEDDL---LEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPK 420
D +K +A N+ D LE+F ++ + F D + ++ +SG+TG+PK
Sbjct: 268 DTFTSVKFDATKYNQSDKFSSLEEFKTPIADVVLPFVYTPVPFSDPLFVMFSSGTTGIPK 327
Query: 421 AVLLTNRG-IVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMTFTMKIT 558
A++ T G ++ H+ D + TT WM + I+
Sbjct: 328 AMVHTVGGTLLKHIEEHLVQGDS--KKHDRMFFYTTCGWMMYNWMIS 372
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.4
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +1
Query: 250 DDLPDLKTEAYICNEDDL---LEDFINGHSNDIDSFRIPEGNPEDTILLLPTSGSTGLPK 420
D +K +A N+ D LE+F ++ + F D + ++ +SG+TG+PK
Sbjct: 268 DTFTSVKFDATKYNQSDKFSSLEEFKTPIADVVLPFVYTPVPFSDPLFVMFSSGTTGIPK 327
Query: 421 AVLLTNRG-IVAHLPTSWTYHTKFPTPTDLVMVLTTAQWMTFTMKIT 558
A++ T G ++ H+ D + TT WM + I+
Sbjct: 328 AMVHTVGGTLLKHIEEHLVQGDS--KKHDRMFFYTTCGWMMYNWMIS 372
>AL132952-13|CAB61154.2| 283|Caenorhabditis elegans Hypothetical
protein Y51H4A.22 protein.
Length = 283
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 175 YFLQLLEPSIVFC---DREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDF 315
YF Q + S V + E+Y+D K S+D + A IC ++ L F
Sbjct: 67 YFAQNMVTSFVHSSSSENEFYSDAKDSIDSMLSDDLVAEICGSNEKLNSF 116
>Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical
protein F10A3.4 protein.
Length = 569
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 442 GIVAHLPTSWTYHTKFPTPTDLVM--VLTTAQWMTFTMKITT---CAVYHIPILVTPKKR 606
G LPT+ T T PT T L LTT + T +TT V P TP+ +
Sbjct: 470 GSTTTLPTTTTTQTPLPTTTILTTRPALTTQSTVFTTQAVTTQQQTTVVKTPTTQTPQNQ 529
Query: 607 T 609
T
Sbjct: 530 T 530
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 226 YNDIKKSLDDLPDLKTEAYICNEDDLLEDFINGHSND 336
Y D KSL +PD+K A + ++E+ I +SND
Sbjct: 432 YTDPLKSLSKIPDVKMNA--SEKSKVIEELIKQNSND 466
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 63 NVVPCGPSGHYRTCNRYS 10
N+VP +G+YRTCN Y+
Sbjct: 870 NLVPVELAGNYRTCNPYA 887
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
protein F14E5.2a protein.
Length = 1149
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 187 LLEPSIVFCDREYYNDIKKSLDDLPDLKTEAYICNEDDLLEDFI 318
L + + F D+E+ D L + + + Y CN+ D ED I
Sbjct: 757 LQQEQVEFDDKEHMADADPKLSQKCEQEIKMYKCNQADTFEDTI 800
>U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical
protein T19B4.5 protein.
Length = 400
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 87 LMVSHHHHNVVPCGPSGHYRTCNRYSA 7
++V HHHH + P H+ NR SA
Sbjct: 40 MVVDHHHHPQLRGNPMHHHHYDNRQSA 66
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 394 TSGSTGLPKAVLLTNRGIVAHLPTS 468
TSGSTG+PK VL+ + + + + ++
Sbjct: 7181 TSGSTGVPKGVLMAEQSVSSFMTSA 7205
>AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical
protein Y105E8A.2 protein.
Length = 534
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 357 GNPKTVDVVTMPIYKIL*KVVFVANVSLC 271
G P+T DVV + + K+ K++ V +S C
Sbjct: 192 GKPRTTDVVYICVEKVQHKILSVTEISSC 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,096,057
Number of Sequences: 27780
Number of extensions: 353124
Number of successful extensions: 934
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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