Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32288
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 177 3e-44
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 177 3e-44
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 177 3e-44
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 177 3e-44
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 177 3e-44
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 173 4e-43
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 161 1e-39
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 161 1e-39
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 161 1e-39
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 161 1e-39
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 144 3e-34
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 104 2e-22
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 51 3e-06
BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60 (ATPase-con... 48 3e-05
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 48 3e-05
AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60 (ATPase-con... 48 3e-05
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 48 3e-05
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 48 3e-05
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 45 2e-04
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 45 2e-04
BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein. 42 0.002
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 42 0.002
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 42 0.002
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 42 0.002
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 39 0.016
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 39 0.016
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 39 0.016
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 39 0.016
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 39 0.016
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 39 0.016
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 37 0.047
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 37 0.047
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 37 0.047
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 37 0.047
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 33 0.58
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 33 0.58
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 33 0.58
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 33 0.58
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 29 9.5
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 29 9.5
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 29 9.5
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 29 9.5
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 177 bits (430), Expect = 3e-44
Identities = 91/166 (54%), Positives = 105/166 (63%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP+++W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 165
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 177 bits (430), Expect = 3e-44
Identities = 91/166 (54%), Positives = 105/166 (63%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP+++W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 165
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 177 bits (430), Expect = 3e-44
Identities = 91/166 (54%), Positives = 105/166 (63%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP+++W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 165
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 177 bits (430), Expect = 3e-44
Identities = 91/166 (54%), Positives = 105/166 (63%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP+++W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 165
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 177 bits (430), Expect = 3e-44
Identities = 91/166 (54%), Positives = 105/166 (63%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP+++W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 165
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 173 bits (421), Expect = 4e-43
Identities = 87/160 (54%), Positives = 100/160 (62%)
Frame = +1
Query: 124 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKCLQYLD 303
LQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAKC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 304 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 483
RA LQ +L GA+V+EKP+++
Sbjct: 61 RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120
Query: 484 WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
W+DVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 121 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 160
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 161 bits (392), Expect = 1e-39
Identities = 85/170 (50%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 109 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKC 288
++S LQKAIDL +KA +EDK NYEEAL+LY+H V YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 289 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 453
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 454 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 172
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 161 bits (392), Expect = 1e-39
Identities = 85/170 (50%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 109 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKC 288
++S LQKAIDL +KA +EDK NYEEAL+LY+H V YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 289 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 453
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 454 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 172
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 161 bits (392), Expect = 1e-39
Identities = 85/170 (50%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 109 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKC 288
++S LQKAIDL +KA +EDK NYEEAL+LY+H V YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 289 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 453
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 454 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 172
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 161 bits (392), Expect = 1e-39
Identities = 85/170 (50%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 109 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKC 288
++S LQKAIDL +KA +EDK NYEEAL+LY+H V YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 289 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 453
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 454 AIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
AIV+E+P+VKWSDVAG VILPIKFPHLFTGKR PW+GILL
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILL 172
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 144 bits (348), Expect = 3e-34
Identities = 83/166 (50%), Positives = 92/166 (55%)
Frame = +1
Query: 106 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAK 285
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H V YFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 286 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 465
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 466 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
EKP VILPIKFPHLFTGK P G LL
Sbjct: 120 EKPQHTVERRGRAGGAKEALKEAVILPIKFPHLFTGKTHPGGGYLL 165
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 104 bits (250), Expect = 2e-22
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = +1
Query: 109 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKC 288
++S LQKAIDL +KA +EDK NYEEAL+LY+H V YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 289 LQYLDRA 309
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 51.2 bits (117), Expect = 3e-06
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 457 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
I + P++KW+D+ G V+ PI++P LFTG PWKG+LL
Sbjct: 172 IYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLL 220
>BX276089-3|CAI16433.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE I+ + P+V+W D+A V+LP+ P F G R PWKG+L+
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 247
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE I+ + P+V+W D+A V+LP+ P F G R PWKG+L+
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 247
>AL078581-3|CAI19506.1| 280|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 280
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE I+ + P+V+W D+A V+LP+ P F G R PWKG+L+
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 247
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE I+ + P+V+W D+A V+LP+ P F G R PWKG+L+
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 247
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE I+ + P+V+W D+A V+LP+ P F G R PWKG+L+
Sbjct: 195 LERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLM 247
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE IV P + W D+A V+LP+ P F G R PWKG+L+
Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLM 246
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +1
Query: 445 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
LE IV P + W D+A V+LP+ P F G R PWKG+L+
Sbjct: 194 LERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLM 246
>BC073998-1|AAH73998.1| 287|Homo sapiens ATAD1 protein protein.
Length = 287
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 475 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILL 603
HV WSD+AG VILPIK HLF R+ P KG+LL
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLL 131
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 475 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILL 603
HV WSD+AG VILPIK HLF R+ P KG+LL
Sbjct: 56 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLL 100
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 475 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILL 603
HV WSD+AG VILPIK HLF R+ P KG+LL
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLL 131
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 475 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILL 603
HV WSD+AG VILPIK HLF R+ P KG+LL
Sbjct: 87 HVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLL 131
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 38.7 bits (86), Expect = 0.016
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 124 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKCLQYLD 303
L++A LVT+A +ED+ +N E+A+ LY V L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 304 RA 309
RA
Sbjct: 146 RA 147
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 38.7 bits (86), Expect = 0.016
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 472 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
P V W D+AG V+ P+ P +FTG R P KGILL
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILL 439
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 38.7 bits (86), Expect = 0.016
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 472 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
P V W D+AG V+ P+ P +FTG R P KGILL
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILL 439
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 38.7 bits (86), Expect = 0.016
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 472 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
P V W D+AG V+ P+ P +FTG R P KGILL
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILL 439
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 38.7 bits (86), Expect = 0.016
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 472 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
P V W D+AG V+ P+ P +FTG R P KGILL
Sbjct: 396 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILL 439
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 38.7 bits (86), Expect = 0.016
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 124 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVXYFLHAVKYEAQGERAKESIRAKCLQYLD 303
L++A LVT+A +ED+ +N E+A+ LY V L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 304 RA 309
RA
Sbjct: 146 RA 147
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.047
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 478 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
VK+ D+AG VILP P LFTG R P +G+LL
Sbjct: 307 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLL 348
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 37.1 bits (82), Expect = 0.047
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 478 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
VK+ D+AG VILP P LFTG R P +G+LL
Sbjct: 339 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLL 380
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 37.1 bits (82), Expect = 0.047
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 478 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
VK+ D+AG VILP P LFTG R P +G+LL
Sbjct: 339 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLL 380
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 37.1 bits (82), Expect = 0.047
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 478 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILL 603
VK+ D+AG VILP P LFTG R P +G+LL
Sbjct: 307 VKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLL 348
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.58
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 457 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
I ++ P+V WSD+ G V P+K P F I P KG+LL
Sbjct: 616 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 665
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 33.5 bits (73), Expect = 0.58
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 457 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
I ++ P+V WSD+ G V P+K P F I P KG+LL
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 33.5 bits (73), Expect = 0.58
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 457 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
I ++ P+V WSD+ G V P+K P F I P KG+LL
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 33.5 bits (73), Expect = 0.58
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 457 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
I ++ P+V WSD+ G V P+K P F I P KG+LL
Sbjct: 617 IAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLL 666
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
V EKP V +SDV G V P+ P F I P KG+LL
Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLL 214
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
V EKP V +SDV G V P+ P F I P KG+LL
Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLL 214
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
V EKP V +SDV G V P+ P F I P KG+LL
Sbjct: 142 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLL 190
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILL 603
V EKP V +SDV G V P+ P F I P KG+LL
Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLL 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,146,354
Number of Sequences: 237096
Number of extensions: 1155943
Number of successful extensions: 2577
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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