Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32286
(391 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 51 5e-08
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 47 1e-06
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 45 4e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 6e-06
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.002
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 35 0.005
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 32 0.027
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.11
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 29 0.19
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 29 0.25
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 29 0.34
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 27 1.0
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 27 1.0
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 27 1.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 1.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 1.4
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 1.8
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 2.4
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 26 2.4
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 4.1
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 25 4.1
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 5.5
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 25 5.5
SPCC330.10 |pcm1||mRNA capping methyltransferase|Schizosaccharom... 25 5.5
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 24 7.2
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 24 7.2
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 24 9.5
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 24 9.5
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 24 9.5
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 24 9.5
SPAC12B10.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 9.5
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 51.2 bits (117), Expect = 5e-08
Identities = 33/113 (29%), Positives = 56/113 (49%)
Frame = +3
Query: 30 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 209
K + ITGA++GIG+S + + + + + EL SKY + DV
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 210 TDEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNVTALITSTL 368
+D + G++ ++ +E IDV+INNAGL + + I+ VT + T+ L
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVL 119
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 46.8 bits (106), Expect = 1e-06
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 24 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRS 203
K K ITG + GIG S+ + G ++ +L + EL K+G + K Y
Sbjct: 8 KGKTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 204 DVTDEEHFLGILNAVVQEQGG-IDVVINNAGL 296
+ + + N V+E GG +DV+I NAG+
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGI 98
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 45.2 bits (102), Expect = 4e-06
Identities = 31/93 (33%), Positives = 51/93 (54%)
Frame = +3
Query: 30 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV 209
+VV ITGAA GIG+ + ++ + G + +A +DI + SK + ++DV
Sbjct: 6 RVVLITGAAGGIGKVLCKMFTELGDR-VAGIDIVDP----------SKVQDAALALQADV 54
Query: 210 TDEEHFLGILNAVVQEQGGIDVVINNAGLMNDS 308
+ + + V+Q G IDV+INNAGL +D+
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGLADDT 87
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 44.4 bits (100), Expect = 6e-06
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 30 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGN-KTKFYRSD 206
KV +TG++ GIG L +G K + + EE + + +++ + + K +F R D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 207 VTDEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNV 344
+ D E + + ++ + +++NNAG+MN + K E+ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 35.9 bits (79), Expect = 0.002
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 36 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDVTD 215
V ITG++ G+G ++V++ L +G IA A ++ +E +K + DVTD
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIA----CSRAPDTITIE-----HSKLLKLKLDVTD 58
Query: 216 EEHFLGILNAVVQEQGGIDVVINNAG 293
+ + G +D+VINNAG
Sbjct: 59 VKSVETAFKDAKRRFGNVDIVINNAG 84
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 34.7 bits (76), Expect = 0.005
Identities = 33/119 (27%), Positives = 50/119 (42%)
Frame = +3
Query: 27 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSD 206
+KV FI G GIG S+V+ L + EA LQ E + + N K D
Sbjct: 5 NKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQ-EWSKSHPN-VKTVELD 62
Query: 207 VTDEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNVTALITSTLKAIEI 383
VT ++ +V + GIDV+ N+G+ + + EV T+ L I +
Sbjct: 63 VTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHV 121
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 32.3 bits (70), Expect = 0.027
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 36 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK 146
+F+TGAA IG +VR LL+ G + + ++ E A K
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVRSEENAAK 39
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 30.3 bits (65), Expect = 0.11
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 27 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKS-LQVELNSKYGNKTKFYRS 203
+K +TG +GIG++ + EG + I + EE + + +L + G +
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREG-SDLVISCLPEERDDAEVTRDLIEREGRNCWIWEG 100
Query: 204 DVTDEEHFLGILNAVVQEQGGIDVVINN 287
+ ++ +++ +++ G IDV++NN
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNN 128
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 29.5 bits (63), Expect = 0.19
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 HEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQ-VELN 167
H ++DK+V G TGI + G KH+ +D++E K++Q VE+N
Sbjct: 51 HLFRDKIVLDVGCGTGI---LSMFCARAGAKHVYGVDMSEIIHKAVQIVEVN 99
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 29.1 bits (62), Expect = 0.25
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +3
Query: 36 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKTKFYRSDV-T 212
V ITG ++G+G+ + +I +G I+ E K L+ G + +DV +
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKG-HQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQS 62
Query: 213 DEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNVTALITSTLKAIEI 383
D ++ I +V ID V++ AG++ S+ + E++ + + T+ + AI++
Sbjct: 63 DMKNLKSIFESV-----EIDTVVHAAGVLQSSLCVRTSEKEID-SIICTNLVSAIKL 113
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 28.7 bits (61), Expect = 0.34
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 18 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY----GNK 185
E +KV+ +TG++ GIG + L + K IA+ ++L ++ + G+
Sbjct: 3 ETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 186 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNVTALITST 365
T+ ++ + G L++V+ G ++ + A + + I ++K ++N +++ +
Sbjct: 62 TEVGKASIETAIKKFGKLDSVILNAGVLEPI---AKIADADINEWRKLFDINFFSVVETV 118
Query: 366 LKAI 377
AI
Sbjct: 119 KYAI 122
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.1 bits (57), Expect = 1.0
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 66 GESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYG-----NKTKFY--RSDVTDEEH 224
GE VV + L G A++D+ EA K + N +Y ++ FY R+D+T E
Sbjct: 95 GEDVVELQLHGGT---AVVDVTLEAIKQSGIP-NIRYAKPGEFSERAFYNGRADLTQLEG 150
Query: 225 FLGILNAVVQEQ 260
+ ++NA EQ
Sbjct: 151 LIDVINAQTAEQ 162
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 1.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 33 VVFITGAATGIGESVVRILLDEGVKHIAIL 122
VV +TG ++GIG+ VV L G + + +L
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.6 bits (56), Expect = 1.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 169 EFSSTCNDFPASSAMSKIAICLTPSSNNILTTDSPMPVAAPV 44
+F T D + M A +T + N+ TTDSPM A PV
Sbjct: 427 DFKET-EDMNGAEDMHGRAPQITKDNLNLTTTDSPMSEAEPV 467
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 21 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDI 128
+K V + GA GIG +++ LL GVK + I+D+
Sbjct: 23 FKSAKVLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 213 DEEHFLGILNAVVQEQGGIDVVINNAGLMNDSIGIYKKA 329
+ EH L L+ +D +NN + +S+ I+KKA
Sbjct: 1139 ESEHLLNELDDTHSSLSTVDFTVNNTESLINSLKIFKKA 1177
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 1.8
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 265 PPCSWTTALRIPRKCSSSVTSDL*N-FVLLPYFEFSSTCNDFPASSAMSKIAICLTPSSN 89
P T A+ P + ++ S N V P F SST N A ++ S +A L PS+
Sbjct: 355 PTIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTA 414
Query: 88 N 86
N
Sbjct: 415 N 415
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Frame = +3
Query: 195 YRSD--VTDEEHFLGI----LNAVVQEQGGIDVVINNAGLMNDSIGIYKKAIEVNVTALI 356
+RSD V ++ F+G N + GG+ ++N G+Y+K + N +
Sbjct: 127 FRSDYMVHQDDSFIGCKQVEFNTISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVN 186
Query: 357 TS 362
TS
Sbjct: 187 TS 188
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 25.8 bits (54), Expect = 2.4
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Frame = +3
Query: 30 KVVFITGAATGIGESVVRILL--DEGVKHIAILDI-AEEAGKSLQVELNSKYGNKTKFYR 200
K VF+TGA +G ++R L+ +K IA++ +EE G + + YG + +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNLKVIALVRASSEEHGLKRLKDSCTAYGVWDESWA 1064
Query: 201 SDVTDEEHFLGILNAVVQEQGG------IDVVINNAGLMNDSIGIYKKAIEVNVTALITS 362
++ L + N ++E+ +D VI+N L++ + Y K NV IT+
Sbjct: 1065 QKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVH-WVYPYSKLRGPNVMGTITA 1123
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 100 PSSNNILTTDSPMPVAAPVI 41
PSSNN T +P+P AAP++
Sbjct: 257 PSSNNQEVTSAPIP-AAPIV 275
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 25.0 bits (52), Expect = 4.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 33 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKY 176
++ ITG + +G ++++ LD G +A LD E A ++ NSK+
Sbjct: 37 LIVITGGSGILGHAIIQEALDRGFS-VASLDSTEPAS---FLQYNSKF 80
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 165 NSKYGNKTKFYRSDVTDEEHFLGILNAV 248
N+ G K+ ++ SDV +HF +L+A+
Sbjct: 150 NAVIGWKSIYHASDVDVHDHFANVLSAL 177
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = +3
Query: 213 DEEHFLGILNAVVQE---QGGIDVVINNA 290
DEEH+ +LNA+ ++ + G+ V++ A
Sbjct: 148 DEEHYNEVLNAMTEKRIGEAGVAVIVQGA 176
>SPCC330.10 |pcm1||mRNA capping
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 389
Score = 24.6 bits (51), Expect = 5.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 80 QDIIRRRS*AYSDLGHRGRSRKIVTS*TKFEIWQQNEVLQ 199
QD++R A DLG++ R + +F W ++ ++Q
Sbjct: 91 QDVVRSHYNARPDLGYKKRQFSPIIQLKRFNNWIKSVLIQ 130
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 24.2 bits (50), Expect = 7.2
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 12 SHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELN--SKYGNK 185
S +K + I GA + +LL I I+D+ ++ + ++LN + ++
Sbjct: 15 SSSFKSIKIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLNKKKAEGEAMDLNHAAPLSHE 74
Query: 186 TKFYRSDVTD 215
T+ Y D D
Sbjct: 75 TRVYLGDYKD 84
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 24.2 bits (50), Expect = 7.2
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +3
Query: 270 DVVINNAGLMNDSIGIYKKAIEVNVTALITSTLKAIE 380
DV + ++ND I I+ + E+N++ ++ +E
Sbjct: 381 DVALKVPSVINDCISIFLEIYELNISYMVQEVTVVME 417
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 23.8 bits (49), Expect = 9.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 LDEGVKHIAILDIAEEAGKSLQVELN-SKYGNKTKFYRSDVTDEEHFLGILNAV 248
L EG H+ + E K Q+EL+ SK + Y+S + +EH L V
Sbjct: 566 LSEGRAHLETANKENEILKQ-QLELSESKLASLLNSYQSFINKKEHLYSFLQLV 618
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 23.8 bits (49), Expect = 9.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 352 KAVTLTSMAFL*MPILSFMRPALLITTSMPPCSWTTALRIP 230
K + LTS+ + +L M+ L+ +++ W ALR P
Sbjct: 358 KCIKLTSLDTYSLLVLEIMKHPSLLISAISQHFWVLALRDP 398
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 23.8 bits (49), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 83 PDHRFADARCSTGYKN 36
PD FA+ RCS YKN
Sbjct: 72 PDLFFANQRCSFKYKN 87
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 23.8 bits (49), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 33 VVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGK 146
V+ T + E+ + LDEG+ + A LD+ EE K
Sbjct: 240 VIVNTARGAVMDEAALVEALDEGIVYSAGLDVFEEEPK 277
>SPAC12B10.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 235
Score = 23.8 bits (49), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 329 GFFVNANTVVHEAGIINHYINAALLLDYSVKDSQEV 222
G + N T+VH I Y A LLD ++++++E+
Sbjct: 141 GAYQNTPTIVHWTVIPKFYQYAFDLLDSALREAKEM 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,541,075
Number of Sequences: 5004
Number of extensions: 29148
Number of successful extensions: 116
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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