Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32286
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    67   8e-14
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   3.8  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   3.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   3.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   3.8  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   3.8  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   3.8  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   3.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   3.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   8.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   8.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   8.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   8.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.7  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 66.9 bits (156), Expect = 8e-14
 Identities = 41/132 (31%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
 Frame = +3

Query: 9   MSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGKSLQVELNSKYGNKT 188
           M   W D+V  +TGA +GIG+ ++  L+ +G+K I I    ++  K+L  EL SK G K 
Sbjct: 1   MEQNWIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKM-KTLVEELKSKPG-KL 58

Query: 189 KFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNA------GLMNDSIGIYKKAIEVNVTA 350
              + D++++   L ++  V +  G ID++INNA       L ND +  +KK  ++N+  
Sbjct: 59  VPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLG 118

Query: 351 LITSTLKAIEIM 386
           L     + +++M
Sbjct: 119 LTCMIQEVLKLM 130


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 296 HERQYWHLQKSH*GQRDRLNNKYI 367
           H R+ W +Q+    + +RL  K I
Sbjct: 38  HRREVWLIQQEREREHERLMKKMI 61


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 115 RSWTSRKKPENRYK 156
           RS TS   P+N+YK
Sbjct: 103 RSSTSSNDPKNQYK 116


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 80  DHRFADARCSTGY 42
           D+ F + RC  GY
Sbjct: 290 DYGFTECRCDPGY 302


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 213 DEEHFLGILNAVVQEQGGID 272
           + E FLGI+N + +    I+
Sbjct: 404 ERERFLGIINNIFKNMSQIE 423


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 213 DEEHFLGILNAVVQEQGGID 272
           + E FLGI+N + +    I+
Sbjct: 404 ERERFLGIINNIFKNMSQIE 423


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 130 AMSKIAICLTPSSNNILTTDSPMPVAAPVI 41
           A+   A+ + P+S   +T +S  P+  PVI
Sbjct: 446 AVRMSALNVQPTSKGRITLNSKDPLDPPVI 475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,065
Number of Sequences: 438
Number of extensions: 2167
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)