Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32284
         (564 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-2|AAB53826.1|  262|Caenorhabditis elegans Hypothetical pr...   107   4e-24
Z81579-8|CAN86617.1|  930|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z81579-7|CAB61019.1|  927|Caenorhabditis elegans Hypothetical pr...    30   1.0  
AF016852-1|AAB94551.1|  927|Caenorhabditis elegans HMP-1 protein.      30   1.0  
AL132951-6|CAC44308.2|  692|Caenorhabditis elegans Hypothetical ...    29   1.7  
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.     29   3.1  
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AC024845-4|AAK84623.2|  214|Caenorhabditis elegans Hypothetical ...    27   7.0  
U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF040643-2|AAB94961.1|  471|Caenorhabditis elegans Hypothetical ...    27   9.3  

>U00048-2|AAB53826.1|  262|Caenorhabditis elegans Hypothetical
           protein C05D11.5 protein.
          Length = 262

 Score =  107 bits (258), Expect = 4e-24
 Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   NLLYAVDVLKGENIQGLIEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 180
           N+ +A +  K   +  LIEPIN+Y++P Y L++Y  A+D+I+   S NL++  D FH QQ
Sbjct: 128 NVRFAAEKFKEHKLICLIEPINKYTIPGYHLNNYEDAMDVIQMDQSNNLKIQYDTFHAQQ 187

Query: 181 IAGDITHNITKLLPYIGHVQIAQVPNRNEPDTPGEINYKYVLEHLAKSGYDEWV-GLEYK 357
           I G I   + KL  YIG++Q+AQVPNR   DT GEI+Y ++ + + +S    WV G EY 
Sbjct: 188 INGQIGAIMRKLKDYIGYIQVAQVPNRGACDTRGEIDYHFIFDEI-RSINPSWVIGAEYL 246

Query: 358 AIGNTKDGLTWINNYGYS 411
              + K    WI N   S
Sbjct: 247 ---DAKPSFNWIENMSLS 261


>Z81579-8|CAN86617.1|  930|Caenorhabditis elegans Hypothetical
           protein R13H4.4b protein.
          Length = 930

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 52  IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 180
           +E +     PK   S+YGR  D+I  ID+   R+ +D  H ++
Sbjct: 250 LESVLNGQQPKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292


>Z81579-7|CAB61019.1|  927|Caenorhabditis elegans Hypothetical
           protein R13H4.4a protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 52  IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 180
           +E +     PK   S+YGR  D+I  ID+   R+ +D  H ++
Sbjct: 250 LESVLNGQQPKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292


>AF016852-1|AAB94551.1|  927|Caenorhabditis elegans HMP-1 protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 52  IEPINQYSMPKYFLSDYGRAVDIIKRIDSPNLRLMLDIFHLQQ 180
           +E +     PK   S+YGR  D+I  ID+   R+ +D  H ++
Sbjct: 250 LESVLNGQQPKVTFSEYGRIGDLINEIDTFQNRIEIDPAHYRR 292


>AL132951-6|CAC44308.2|  692|Caenorhabditis elegans Hypothetical
           protein Y67H2A.7 protein.
          Length = 692

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 73  SMPKYFLSDYGRAVDIIKRIDSPNLRLMLD 162
           ++ +YF SD G   DII+R D P  +L ++
Sbjct: 501 NLMEYFFSDLGVMTDIIRRTDRPEEQLSIE 530


>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
          Length = 1404

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
 Frame = -1

Query: 420 KSKTVTIIVDPSQ--------TILRVSDGFIFES----NPFIVSALSQVF*NIFVVYLSG 277
           +S  VT++ D +Q        + LR +D F+ ES    +PF+  AL     +I V  L+ 
Sbjct: 209 RSNLVTVVDDGAQNPVVKKVISYLRDADIFVSESIPIDHPFLAQALEDSDSSIVVSVLNK 268

Query: 276 RVRLVTIRNLSYLHMSNVW 220
           +  L T+++ S   MS +W
Sbjct: 269 QQLLKTVKHPSIYAMSKMW 287


>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
           protein F35H10.10 protein.
          Length = 1404

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
 Frame = -1

Query: 420 KSKTVTIIVDPSQ--------TILRVSDGFIFES----NPFIVSALSQVF*NIFVVYLSG 277
           +S  VT++ D +Q        + LR +D F+ ES    +PF+  AL     +I V  L+ 
Sbjct: 209 RSNLVTVVDDGAQNPVVKKVISYLRDADIFVSESIPIDHPFLAQALEDSDSSIVVSVLNK 268

Query: 276 RVRLVTIRNLSYLHMSNVW 220
           +  L T+++ S   MS +W
Sbjct: 269 QQLLKTVKHPSIYAMSKMW 287


>AC024845-4|AAK84623.2|  214|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.7 protein.
          Length = 214

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 21/87 (24%), Positives = 42/87 (48%)
 Frame = -1

Query: 399 IVDPSQTILRVSDGFIFESNPFIVSALSQVF*NIFVVYLSGRVRLVTIRNLSYLHMSNVW 220
           IV+     LRVS  F+F     IV +++Q+   +    ++ R+R       S+++MS  +
Sbjct: 78  IVEYCDLCLRVSMEFMFPVGVLIVFSITQILITV-SPGMASRIRNPIPSLASFIYMSFFF 136

Query: 219 Q*FRNIMSNVASDLLKMKNVQHQSQIW 139
           +   N+++++A  +L       Q   W
Sbjct: 137 KCITNLLTSIA--MLPYLGCTDQPSFW 161


>U70848-1|AAB09107.2|  434|Caenorhabditis elegans Hypothetical
           protein C43G2.1 protein.
          Length = 434

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 86  YLGIEYWLIGSISPWIFSPF 27
           Y+GI   +IGS  PWI+  F
Sbjct: 273 YMGISLLIIGSFIPWIYYGF 292


>AF040643-2|AAB94961.1|  471|Caenorhabditis elegans Hypothetical
           protein F14D2.7 protein.
          Length = 471

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 463 YKVNIFNQYLKRDNKIKDCNH 401
           Y++N F QY++  N  +DC H
Sbjct: 338 YRLNAFAQYIESMNNEEDCGH 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,353,891
Number of Sequences: 27780
Number of extensions: 251862
Number of successful extensions: 654
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)