Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32282
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 55 2e-08
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 1.7
Z49913-1|CAA90142.1| 340|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical pr... 28 3.0
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 28 3.0
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 55.2 bits (127), Expect = 2e-08
Identities = 37/117 (31%), Positives = 59/117 (50%)
Frame = +3
Query: 60 YHSGAGVFGHRPTIADEYEIPEDIISKRYKNCRAQQLVDAYRTYGHLKATIDNVDYRNES 239
Y G GVFGH P + E+ +N + L++A+R YG+L+A +D + R +
Sbjct: 24 YRPGHGVFGHLPD--PPKRVFENQGGLTPENAQRVHLINAFRRYGYLEADLDPLGLR-KV 80
Query: 240 RNIKELHYSRYGLDPEETVDTGLLYGYSGXNSIKSLFDELVKIYCGHISYEFTHLES 410
++ EL + YGL +E V G S+ L ++L IYCG + EF H+ +
Sbjct: 81 ESVAELDPAIYGLSLDENV--------KGNFSLHDLAEQLRHIYCGPTAIEFMHINN 129
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 55.2 bits (127), Expect = 2e-08
Identities = 37/117 (31%), Positives = 59/117 (50%)
Frame = +3
Query: 60 YHSGAGVFGHRPTIADEYEIPEDIISKRYKNCRAQQLVDAYRTYGHLKATIDNVDYRNES 239
Y G GVFGH P + E+ +N + L++A+R YG+L+A +D + R +
Sbjct: 24 YRPGHGVFGHLPD--PPKRVFENQGGLTPENAQRVHLINAFRRYGYLEADLDPLGLR-KV 80
Query: 240 RNIKELHYSRYGLDPEETVDTGLLYGYSGXNSIKSLFDELVKIYCGHISYEFTHLES 410
++ EL + YGL +E V G S+ L ++L IYCG + EF H+ +
Sbjct: 81 ESVAELDPAIYGLSLDENV--------KGNFSLHDLAEQLRHIYCGPTAIEFMHINN 129
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 409 DSKCVNSYDICPQYILTSSSN 347
D++CVN+Y ICP + S SN
Sbjct: 1750 DAQCVNNYCICPSNRVISGSN 1770
>Z49913-1|CAA90142.1| 340|Caenorhabditis elegans Hypothetical
protein ZK938.2 protein.
Length = 340
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 262 IRGTVSIPKKQWTRDSCMVIAATTQSKAYSMNW--LKYIAGIYRMSSRIW 405
++GTV + K C+ I +S+ Y +NW L ++R S +W
Sbjct: 25 VKGTVVLTNKTPLDARCVTIKCRGKSETYLINWTDLYCKKDLFRKSEMVW 74
>Z81508-1|CAB04142.1| 331|Caenorhabditis elegans Hypothetical
protein F20E11.1 protein.
Length = 331
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -1
Query: 233 ISVVYVIYSSF*MS-VRTVSVDQLLRSAVLISL*YYVLWNLVFI 105
+ V Y+++ S + + VSV+ L + VLI+L ++ L+N+++I
Sbjct: 71 VKVSYLVFVSACFNFILAVSVNSLQTNRVLIALLFFALFNVLYI 114
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 27.9 bits (59), Expect = 3.0
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = +3
Query: 156 RAQQLVDAYRTYGHLKATIDNVDYRNESRNIK---ELHYSRYGLDPEETVDTGLLYGYSG 326
+ Q L+ +Y+T GH A +D + + + EL S YGL + LL +
Sbjct: 140 KIQLLIRSYQTRGHNIADLDPLGINSADLDDTIPPELELSFYGLGERDLDREFLLPPTTF 199
Query: 327 XNSIKSL-----FDELVKIYCGHISYEFTHLES 410
+ KSL L IYC E+ HL +
Sbjct: 200 ISEKKSLTLREILQRLKDIYCTSTGVEYMHLNN 232
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 86 PEDSRARMVQNTIVQTIH-LTP 24
PEDS+A MV ++ T+H LTP
Sbjct: 230 PEDSKAAMVAPVLLATVHNLTP 251
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 86 PEDSRARMVQNTIVQTIH-LTP 24
PEDS+A MV ++ T+H LTP
Sbjct: 230 PEDSKAAMVAPVLLATVHNLTP 251
>Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical
protein F49E12.5a protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 129 IISKRYKNCRAQQLVDAYRTYGHLKATIDNV 221
IIS + C ++ L++ YR+Y ++ +T N+
Sbjct: 3 IISSVNRTCASESLLELYRSYKYILSTSFNI 33
>Z66520-4|CAE48504.1| 174|Caenorhabditis elegans Hypothetical
protein F49E12.5b protein.
Length = 174
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 129 IISKRYKNCRAQQLVDAYRTYGHLKATIDNV 221
IIS + C ++ L++ YR+Y ++ +T N+
Sbjct: 18 IISSVNRTCASESLLELYRSYKYILSTSFNI 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,280,262
Number of Sequences: 27780
Number of extensions: 178671
Number of successful extensions: 543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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