Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32279
         (503 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.15 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.59 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   4.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.2  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +1

Query: 334 LSENSFTNVTLMADLSIEILNLSRCKIDVIENASFKELQEMRVLDLSYNKL 486
           L  +     T +  + + +LNLS   +  I+   FK+L  +++LDL  N +
Sbjct: 321 LGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSI 371



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +1

Query: 451 EMRVLDLSYNKLT 489
           ++R+LDLS N++T
Sbjct: 213 DIRILDLSRNEIT 225


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 122 LHRWISL*RRYNTWEPAPTLL 184
           L +W +   +YNTWEP   L+
Sbjct: 262 LIKWKNWDLKYNTWEPISNLI 282


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 297 PFFFTEERVQILIVAINF 244
           PFF+ +E   + +V +NF
Sbjct: 380 PFFYVQEDDDVKLVLLNF 397


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 179 TLALAPRCCNVFTMRSSDEEKYEDS 105
           +LA   +CC  FTM  S + +++++
Sbjct: 803 SLAHQDQCCPGFTMTKSGKTRHQNT 827


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/46 (19%), Positives = 22/46 (47%)
 Frame = +1

Query: 286 KEKWAALADFKPKIVDLSENSFTNVTLMADLSIEILNLSRCKIDVI 423
           +E W     F+  +     ++ TN  + A L  E++  ++C + ++
Sbjct: 372 QELWIFTISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKCDVSLL 417


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 161 WEPAPTLLQDHLKPRLPIFV 220
           W+P PTL        LP FV
Sbjct: 387 WQPKPTLEDAPQNSLLPNFV 406


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,301
Number of Sequences: 438
Number of extensions: 2544
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)