Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32267
(561 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for ... 218 1e-56
Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for ... 217 2e-56
X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide dism... 217 2e-56
X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for ... 217 2e-56
X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide dism... 217 2e-56
M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human manganese... 217 2e-56
BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,... 217 2e-56
BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,... 217 2e-56
AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing su... 217 2e-56
AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,... 217 2e-56
AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,... 217 2e-56
X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for ... 215 7e-56
AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing su... 211 1e-54
AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing su... 211 1e-54
DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing su... 211 1e-54
AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing su... 211 1e-54
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 31 2.8
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 31 2.8
AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein. 31 2.8
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 31 2.8
Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein. 30 6.4
AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter pro... 30 6.4
AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette tr... 30 6.4
AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein p... 30 6.4
U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette tran... 29 8.5
>Y00472-1|CAA68533.1| 222|Homo sapiens protein ( Human mRNA for Mn
superoxide dismutase (EC 1.15.1.1.). ).
Length = 222
Score = 218 bits (533), Expect = 1e-56
Identities = 94/132 (71%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NKQ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKQRGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>Y00985-1|CAA68791.1| 222|Homo sapiens protein ( Human mRNA for
manganese-containing superoxide dismutase. ).
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>X59445-1|CAA42066.1| 222|Homo sapiens manganese superoxide
dismutase (MnSOD) protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>X15132-1|CAA33228.1| 222|Homo sapiens protein ( Human mRNA for
manganese containing superoxide dismutase (EC
1.15.1.1). ).
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>X14322-1|CAA32502.1| 222|Homo sapiens Manganese superoxide
dismutase protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>M36693-1|AAA36622.1| 222|Homo sapiens protein ( Human
manganese-containing superoxide dismutase mRNA, complete
cds. ).
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>BT006967-1|AAP35613.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>BC012423-1|AAH12423.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>AY280721-1|AAP34410.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 82 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 141
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 142 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 201
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 202 NVINWENVTERY 213
>AY267901-1|AAP03428.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>AL135914-1|CAI21845.1| 222|Homo sapiens superoxide dismutase 2,
mitochondrial protein.
Length = 222
Score = 217 bits (530), Expect = 2e-56
Identities = 93/132 (70%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>X07834-1|CAA30687.1| 222|Homo sapiens protein ( Human mRNA for
manganese superoxide dismutase (EC 1.15.1.1). ).
Length = 222
Score = 215 bits (526), Expect = 7e-56
Identities = 93/132 (70%), Positives = 110/132 (83%), Gaps = 1/132 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A++ DFGS+D K +L+ ASV VQGS
Sbjct: 86 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKLDFGSFDKFKEKLTAASVGVQGS 145
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 146 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 205
Query: 199 DVANWNDISQRY 164
+V NW ++++RY
Sbjct: 206 NVINWENVTERY 217
>AY280719-1|AAP34408.1| 210|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 210
Score = 211 bits (516), Expect = 1e-54
Identities = 91/129 (70%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 82 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 141
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 142 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 201
Query: 199 DVANWNDIS 173
+V NW +++
Sbjct: 202 NVINWENVT 210
>AY280718-1|AAP34407.1| 213|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 213
Score = 211 bits (516), Expect = 1e-54
Identities = 91/129 (70%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 85 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 144
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 145 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 204
Query: 199 DVANWNDIS 173
+V NW +++
Sbjct: 205 NVINWENVT 213
>DQ003134-1|AAY21807.1| 212|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 212
Score = 211 bits (515), Expect = 1e-54
Identities = 91/128 (71%), Positives = 107/128 (83%), Gaps = 1/128 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 85 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 144
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 145 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 204
Query: 199 DVANWNDI 176
+V NW ++
Sbjct: 205 NVINWENV 212
>AY280720-1|AAP34409.1| 209|Homo sapiens manganese-containing
superoxide dismutase protein.
Length = 209
Score = 211 bits (515), Expect = 1e-54
Identities = 91/128 (71%), Positives = 107/128 (83%), Gaps = 1/128 (0%)
Frame = -3
Query: 556 PALKFNGGGHINHSIFWHNLSPNGG-KPSDVLTKAVEKDFGSWDNLKNQLSTASVAVQGS 380
PALKFNGGGHINHSIFW NLSPNGG +P L +A+++DFGS+D K +L+ ASV VQGS
Sbjct: 82 PALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGS 141
Query: 379 GWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKAIF 200
GWGWLG+NK+ LQIA C NQDPLQ TTGL+PL GIDVWEHAYYLQYKNVR DY+KAI+
Sbjct: 142 GWGWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIW 201
Query: 199 DVANWNDI 176
+V NW ++
Sbjct: 202 NVINWENV 209
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 409 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 308
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1799 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1832
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 409 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 308
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 693 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 726
>AK131479-1|BAD18624.1| 279|Homo sapiens Da (GTF3C1). protein.
Length = 279
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 409 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 308
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 100 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 133
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 31.1 bits (67), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 409 STASVAVQGSGWGWLGYNKQMKKLQIATCQNQDP 308
+TA + GS W WL ++ ++K + A Q +DP
Sbjct: 1547 NTARLVAMGSAWPWLLHSVRLKDREDADIQREDP 1580
>Y15635-1|CAA75729.1| 2273|Homo sapiens ABCR protein.
Length = 2273
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 272 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 451
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 452 N 454
+
Sbjct: 1116 S 1116
>AF001945-1|AAC05632.1| 2273|Homo sapiens rim ABC transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 272 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 451
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 452 N 454
+
Sbjct: 1116 S 1116
>AF000148-1|AAC23915.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 272 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 451
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1115
Query: 452 N 454
+
Sbjct: 1116 S 1116
>AB210040-1|BAE06122.1| 2303|Homo sapiens ABCA4 variant protein
protein.
Length = 2303
Score = 29.9 bits (64), Expect = 6.4
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 272 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL*VIPGSKVFL 451
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L G + +
Sbjct: 1086 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTIIM 1145
Query: 452 N 454
+
Sbjct: 1146 S 1146
>U88667-1|AAC51144.1| 2273|Homo sapiens ATP-binding cassette
transporter protein.
Length = 2273
Score = 29.5 bits (63), Expect = 8.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 272 SEERDQSSGGLQRILVLACSYLQFLHLFVVAKPTPA*ALYCHRSCRQLIL 421
+EE SGG+QR L +A +++ + ++ +PT Y RS L+L
Sbjct: 1056 NEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLL 1105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,647,420
Number of Sequences: 237096
Number of extensions: 2138999
Number of successful extensions: 4383
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4366
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -