Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32263
         (758 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,135...    29   3.0  
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573...    29   4.0  

>01_01_0154 - 1355601-1356102,1356197-1356389,1356465-1356520,
            1356997-1357066,1357188-1357314,1357418-1357695,
            1357908-1358065,1358166-1358246,1358339-1358410,
            1358531-1358602,1358729-1358867,1358987-1360045,
            1360170-1360257
          Length = 964

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 134  QLTET-ELMLLKCGVGAAY*GFYGQPTARTSRSYNSLKGERSTPV 3
            QL E  EL   +C +G A+  FY  P +  + SYN+   +RS  V
Sbjct: 894  QLQECLELEDARCAIGDAHNEFYPDPRSDHNLSYNTYVSDRSNDV 938


>10_08_0165 +
           15356748-15356811,15357113-15357186,15357311-15357394,
           15357508-15357602,15357737-15357790,15357791-15357896,
           15358236-15358277,15358585-15358674,15358788-15358984,
           15359355-15359413,15360166-15362252
          Length = 983

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 572 IPYDVLVIQNFKKAVHFILFYIDHG 646
           + YD+   ++F KA +++  Y+DHG
Sbjct: 141 VVYDITSSESFNKAQYWVKMYVDHG 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,895,424
Number of Sequences: 37544
Number of extensions: 426928
Number of successful extensions: 1474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)